Hb_012278_010

Information

Type -
Description -
Location Contig12278: 16146-22514
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012278_010 0.0 - - -
2 Hb_102408_010 0.0556623579 - - hypothetical protein JCGZ_27060 [Jatropha curcas]
3 Hb_004041_070 0.1443656076 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000009_260 0.1788588305 - - PREDICTED: probable vacuolar amino acid transporter YPQ1 isoform X1 [Jatropha curcas]
5 Hb_034558_010 0.1803870576 - - -
6 Hb_128894_010 0.1813930284 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_007658_030 0.1835603477 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
8 Hb_106595_010 0.1836185398 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
9 Hb_001766_090 0.1841856595 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
10 Hb_000484_050 0.1850344389 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
11 Hb_044724_020 0.1861519427 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
12 Hb_030593_010 0.1868119286 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
13 Hb_000215_380 0.1891326107 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
14 Hb_007328_020 0.1895357728 - - -
15 Hb_011909_130 0.1897469588 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
16 Hb_000563_370 0.1897752247 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
17 Hb_015784_010 0.1902963816 - - hypothetical protein VITISV_019364 [Vitis vinifera]
18 Hb_007264_050 0.1906072812 - - -
19 Hb_030312_060 0.191501401 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
20 Hb_023827_010 0.1927991827 - - Cucumber peeling cupredoxin, putative [Ricinus communis]

Gene co-expression network

sample Hb_012278_010 Hb_012278_010 Hb_102408_010 Hb_102408_010 Hb_012278_010--Hb_102408_010 Hb_004041_070 Hb_004041_070 Hb_012278_010--Hb_004041_070 Hb_000009_260 Hb_000009_260 Hb_012278_010--Hb_000009_260 Hb_034558_010 Hb_034558_010 Hb_012278_010--Hb_034558_010 Hb_128894_010 Hb_128894_010 Hb_012278_010--Hb_128894_010 Hb_007658_030 Hb_007658_030 Hb_012278_010--Hb_007658_030 Hb_102408_010--Hb_004041_070 Hb_102408_010--Hb_000009_260 Hb_003793_020 Hb_003793_020 Hb_102408_010--Hb_003793_020 Hb_000994_010 Hb_000994_010 Hb_102408_010--Hb_000994_010 Hb_001081_040 Hb_001081_040 Hb_102408_010--Hb_001081_040 Hb_004041_070--Hb_003793_020 Hb_004041_070--Hb_000009_260 Hb_004604_020 Hb_004604_020 Hb_004041_070--Hb_004604_020 Hb_004044_060 Hb_004044_060 Hb_004041_070--Hb_004044_060 Hb_000009_260--Hb_003793_020 Hb_000009_260--Hb_004044_060 Hb_004324_410 Hb_004324_410 Hb_000009_260--Hb_004324_410 Hb_034558_010--Hb_128894_010 Hb_106595_010 Hb_106595_010 Hb_034558_010--Hb_106595_010 Hb_034558_010--Hb_007658_030 Hb_001766_090 Hb_001766_090 Hb_034558_010--Hb_001766_090 Hb_044724_020 Hb_044724_020 Hb_034558_010--Hb_044724_020 Hb_000484_050 Hb_000484_050 Hb_034558_010--Hb_000484_050 Hb_128894_010--Hb_106595_010 Hb_128894_010--Hb_044724_020 Hb_000215_380 Hb_000215_380 Hb_128894_010--Hb_000215_380 Hb_007328_020 Hb_007328_020 Hb_128894_010--Hb_007328_020 Hb_000563_370 Hb_000563_370 Hb_128894_010--Hb_000563_370 Hb_007658_030--Hb_000484_050 Hb_011909_130 Hb_011909_130 Hb_007658_030--Hb_011909_130 Hb_030593_010 Hb_030593_010 Hb_007658_030--Hb_030593_010 Hb_007658_030--Hb_001766_090 Hb_007658_030--Hb_128894_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.768012 0 0 0.0551621 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0449232 0

CAGE analysis