Hb_012363_010

Information

Type -
Description -
Location Contig12363: 7675-10857
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012363_010 0.0 - - -
2 Hb_003752_050 0.1930859739 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
3 Hb_130788_010 0.2990382003 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
4 Hb_019654_080 0.3011686343 - - -
5 Hb_000392_390 0.3156292555 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_002139_010 0.3158890496 - - -
7 Hb_000042_190 0.3164367836 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004321_010 0.3271944703 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_001195_390 0.3360672202 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
10 Hb_135624_010 0.3449898496 - - PREDICTED: inositol transporter 4-like [Jatropha curcas]
11 Hb_000735_150 0.3488192885 - - hypothetical protein JCGZ_15322 [Jatropha curcas]
12 Hb_001009_130 0.3507695281 - - hypothetical protein JCGZ_11336 [Jatropha curcas]
13 Hb_046440_010 0.3605020917 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
14 Hb_124518_010 0.3648487991 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
15 Hb_063912_010 0.366212992 - - PREDICTED: elongation factor 1-alpha-like, partial [Cucumis sativus]
16 Hb_013925_010 0.3694860902 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]
17 Hb_011639_070 0.3769393818 - - PREDICTED: uncharacterized protein LOC105636024 isoform X2 [Jatropha curcas]
18 Hb_005357_090 0.3779954161 - - ubiquitin, putative [Ricinus communis]
19 Hb_001930_020 0.3802430898 - - PREDICTED: pectinesterase QRT1 [Jatropha curcas]
20 Hb_007467_020 0.3824730013 - - -

Gene co-expression network

sample Hb_012363_010 Hb_012363_010 Hb_003752_050 Hb_003752_050 Hb_012363_010--Hb_003752_050 Hb_130788_010 Hb_130788_010 Hb_012363_010--Hb_130788_010 Hb_019654_080 Hb_019654_080 Hb_012363_010--Hb_019654_080 Hb_000392_390 Hb_000392_390 Hb_012363_010--Hb_000392_390 Hb_002139_010 Hb_002139_010 Hb_012363_010--Hb_002139_010 Hb_000042_190 Hb_000042_190 Hb_012363_010--Hb_000042_190 Hb_003752_050--Hb_019654_080 Hb_003752_050--Hb_130788_010 Hb_046440_010 Hb_046440_010 Hb_003752_050--Hb_046440_010 Hb_001195_390 Hb_001195_390 Hb_003752_050--Hb_001195_390 Hb_003752_050--Hb_000392_390 Hb_002243_040 Hb_002243_040 Hb_130788_010--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_130788_010--Hb_013925_010 Hb_130788_010--Hb_019654_080 Hb_005470_010 Hb_005470_010 Hb_130788_010--Hb_005470_010 Hb_000160_200 Hb_000160_200 Hb_130788_010--Hb_000160_200 Hb_006061_010 Hb_006061_010 Hb_019654_080--Hb_006061_010 Hb_019654_080--Hb_000392_390 Hb_003540_130 Hb_003540_130 Hb_019654_080--Hb_003540_130 Hb_001993_020 Hb_001993_020 Hb_019654_080--Hb_001993_020 Hb_001903_080 Hb_001903_080 Hb_000392_390--Hb_001903_080 Hb_000392_390--Hb_002139_010 Hb_043674_060 Hb_043674_060 Hb_000392_390--Hb_043674_060 Hb_000160_030 Hb_000160_030 Hb_000392_390--Hb_000160_030 Hb_011639_060 Hb_011639_060 Hb_002139_010--Hb_011639_060 Hb_011063_020 Hb_011063_020 Hb_002139_010--Hb_011063_020 Hb_002139_010--Hb_000160_030 Hb_002139_010--Hb_046440_010 Hb_002139_010--Hb_003752_050 Hb_052983_010 Hb_052983_010 Hb_000042_190--Hb_052983_010 Hb_001930_020 Hb_001930_020 Hb_000042_190--Hb_001930_020 Hb_002357_050 Hb_002357_050 Hb_000042_190--Hb_002357_050 Hb_005357_090 Hb_005357_090 Hb_000042_190--Hb_005357_090 Hb_124518_010 Hb_124518_010 Hb_000042_190--Hb_124518_010 Hb_005078_030 Hb_005078_030 Hb_000042_190--Hb_005078_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.08782 0 0 0 0 0.201365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.512442 0.177541 0

CAGE analysis