Hb_012371_010

Information

Type -
Description -
Location Contig12371: 3386-3624
Sequence    

Annotation

kegg
ID tcc:TCM_035988
description hypothetical protein
nr
ID XP_012081592.1
description PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061FIK6
description Uncharacterized protein OS=Theobroma cacao GN=TCM_035988 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012371_010 0.0 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
2 Hb_007157_030 0.1795393121 - - PREDICTED: protein LURP-one-related 6-like [Jatropha curcas]
3 Hb_008438_010 0.2214039806 - - PREDICTED: uncharacterized protein LOC104245771 [Nicotiana sylvestris]
4 Hb_002660_060 0.3025816127 - - PREDICTED: uncharacterized protein LOC105642215 [Jatropha curcas]
5 Hb_001141_290 0.3119076317 - - -
6 Hb_001477_150 0.3246249359 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_000398_050 0.3252651864 - - PREDICTED: protein NRT1/ PTR FAMILY 4.3 [Jatropha curcas]
8 Hb_010506_010 0.3276112318 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
9 Hb_091889_020 0.3333600712 - - -
10 Hb_000671_160 0.3365670115 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
11 Hb_000120_150 0.3376693947 - - hypothetical protein JCGZ_08453 [Jatropha curcas]
12 Hb_003055_170 0.3385102796 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 25 isoform X1 [Jatropha curcas]
13 Hb_000649_150 0.338918003 - - PREDICTED: uncharacterized protein LOC105634115 [Jatropha curcas]
14 Hb_185754_010 0.3402283508 - - receptor protein kinase, putative [Ricinus communis]
15 Hb_007975_050 0.341456282 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
16 Hb_005162_100 0.3434269184 - - ATP binding protein, putative [Ricinus communis]
17 Hb_001930_040 0.3451985632 - - PREDICTED: serine acetyltransferase 1, chloroplastic-like [Beta vulgaris subsp. vulgaris]
18 Hb_000943_060 0.3497240925 - - PREDICTED: uncharacterized protein LOC105635589 [Jatropha curcas]
19 Hb_000866_250 0.3499925913 - - acyl-CoA thioesterase, putative [Ricinus communis]
20 Hb_163206_010 0.3536810491 - - hypothetical protein JCGZ_01203 [Jatropha curcas]

Gene co-expression network

sample Hb_012371_010 Hb_012371_010 Hb_007157_030 Hb_007157_030 Hb_012371_010--Hb_007157_030 Hb_008438_010 Hb_008438_010 Hb_012371_010--Hb_008438_010 Hb_002660_060 Hb_002660_060 Hb_012371_010--Hb_002660_060 Hb_001141_290 Hb_001141_290 Hb_012371_010--Hb_001141_290 Hb_001477_150 Hb_001477_150 Hb_012371_010--Hb_001477_150 Hb_000398_050 Hb_000398_050 Hb_012371_010--Hb_000398_050 Hb_007157_030--Hb_008438_010 Hb_163206_010 Hb_163206_010 Hb_007157_030--Hb_163206_010 Hb_007157_030--Hb_002660_060 Hb_000671_160 Hb_000671_160 Hb_007157_030--Hb_000671_160 Hb_000117_100 Hb_000117_100 Hb_007157_030--Hb_000117_100 Hb_008438_010--Hb_001477_150 Hb_008438_010--Hb_002660_060 Hb_002046_070 Hb_002046_070 Hb_008438_010--Hb_002046_070 Hb_003055_170 Hb_003055_170 Hb_008438_010--Hb_003055_170 Hb_002805_020 Hb_002805_020 Hb_002660_060--Hb_002805_020 Hb_002660_060--Hb_000671_160 Hb_000671_170 Hb_000671_170 Hb_002660_060--Hb_000671_170 Hb_002486_010 Hb_002486_010 Hb_002660_060--Hb_002486_010 Hb_000676_270 Hb_000676_270 Hb_002660_060--Hb_000676_270 Hb_000554_030 Hb_000554_030 Hb_002660_060--Hb_000554_030 Hb_014720_090 Hb_014720_090 Hb_001141_290--Hb_014720_090 Hb_000866_250 Hb_000866_250 Hb_001141_290--Hb_000866_250 Hb_094890_010 Hb_094890_010 Hb_001141_290--Hb_094890_010 Hb_003055_150 Hb_003055_150 Hb_001141_290--Hb_003055_150 Hb_011081_040 Hb_011081_040 Hb_001141_290--Hb_011081_040 Hb_001080_010 Hb_001080_010 Hb_001141_290--Hb_001080_010 Hb_003020_170 Hb_003020_170 Hb_001477_150--Hb_003020_170 Hb_000943_060 Hb_000943_060 Hb_001477_150--Hb_000943_060 Hb_001951_250 Hb_001951_250 Hb_001477_150--Hb_001951_250 Hb_000130_230 Hb_000130_230 Hb_001477_150--Hb_000130_230 Hb_001477_150--Hb_002046_070 Hb_000028_500 Hb_000028_500 Hb_000398_050--Hb_000028_500 Hb_000191_010 Hb_000191_010 Hb_000398_050--Hb_000191_010 Hb_026198_030 Hb_026198_030 Hb_000398_050--Hb_026198_030 Hb_001894_180 Hb_001894_180 Hb_000398_050--Hb_001894_180 Hb_000398_050--Hb_000554_030 Hb_023344_070 Hb_023344_070 Hb_000398_050--Hb_023344_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.12034 0 1.78661 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.30369 1.56636 0.61342 0

CAGE analysis