Hb_012395_110

Information

Type -
Description -
Location Contig12395: 50983-52839
Sequence    

Annotation

kegg
ID pop:POPTR_0010s07710g
description POPTRDRAFT_725917; Ca+2-binding EF hand family protein
nr
ID XP_012069904.1
description PREDICTED: peroxygenase [Jatropha curcas]
swissprot
ID Q9SQ57
description Peroxygenase OS=Sesamum indicum GN=SOP1 PE=1 SV=1
trembl
ID A0A067L8E5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02382 PE=4 SV=1
Gene Ontology
ID GO:0005773
description peroxygenase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07266: 50999-52753
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012395_110 0.0 - - PREDICTED: peroxygenase [Jatropha curcas]
2 Hb_004007_070 0.0803510608 - - adenylsulfate kinase, putative [Ricinus communis]
3 Hb_000086_090 0.1000387951 - - PREDICTED: U-box domain-containing protein 3 [Jatropha curcas]
4 Hb_004241_110 0.100097273 - - Minor allergen Alt a, putative [Ricinus communis]
5 Hb_001102_160 0.1083918157 - - PREDICTED: galacturonokinase [Jatropha curcas]
6 Hb_084147_010 0.1111779155 - - amino acid transporter, putative [Ricinus communis]
7 Hb_019516_060 0.1153467132 - - PREDICTED: uncharacterized protein LOC105634259 [Jatropha curcas]
8 Hb_002893_030 0.1301299257 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Populus euphratica]
9 Hb_000098_170 0.1316513913 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
10 Hb_000025_160 0.1327489231 - - PREDICTED: F-box protein At2g26850 isoform X1 [Jatropha curcas]
11 Hb_006153_160 0.1332173063 - - PREDICTED: oxysterol-binding protein-related protein 2A isoform X4 [Jatropha curcas]
12 Hb_003086_030 0.1338647643 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
13 Hb_000049_270 0.1356211123 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
14 Hb_002815_020 0.1371389848 transcription factor TF Family: G2-like Homeodomain-like superfamily protein isoform 2 [Theobroma cacao]
15 Hb_003125_210 0.1378293176 - - Phospholipase C 4 precursor, putative [Ricinus communis]
16 Hb_000349_200 0.1413725177 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Jatropha curcas]
17 Hb_010883_180 0.1415784265 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
18 Hb_003001_130 0.1450979365 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000227_280 0.1451376443 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
20 Hb_000260_110 0.1455379836 - - Nodulation receptor kinase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_012395_110 Hb_012395_110 Hb_004007_070 Hb_004007_070 Hb_012395_110--Hb_004007_070 Hb_000086_090 Hb_000086_090 Hb_012395_110--Hb_000086_090 Hb_004241_110 Hb_004241_110 Hb_012395_110--Hb_004241_110 Hb_001102_160 Hb_001102_160 Hb_012395_110--Hb_001102_160 Hb_084147_010 Hb_084147_010 Hb_012395_110--Hb_084147_010 Hb_019516_060 Hb_019516_060 Hb_012395_110--Hb_019516_060 Hb_000098_170 Hb_000098_170 Hb_004007_070--Hb_000098_170 Hb_004007_070--Hb_000086_090 Hb_000049_270 Hb_000049_270 Hb_004007_070--Hb_000049_270 Hb_000365_280 Hb_000365_280 Hb_004007_070--Hb_000365_280 Hb_002893_030 Hb_002893_030 Hb_004007_070--Hb_002893_030 Hb_000086_090--Hb_000098_170 Hb_000086_090--Hb_001102_160 Hb_010883_180 Hb_010883_180 Hb_000086_090--Hb_010883_180 Hb_000349_200 Hb_000349_200 Hb_000086_090--Hb_000349_200 Hb_004241_110--Hb_084147_010 Hb_003001_130 Hb_003001_130 Hb_004241_110--Hb_003001_130 Hb_007894_070 Hb_007894_070 Hb_004241_110--Hb_007894_070 Hb_000227_280 Hb_000227_280 Hb_004241_110--Hb_000227_280 Hb_001318_100 Hb_001318_100 Hb_004241_110--Hb_001318_100 Hb_001102_160--Hb_084147_010 Hb_001102_160--Hb_004007_070 Hb_001102_160--Hb_019516_060 Hb_000246_130 Hb_000246_130 Hb_001102_160--Hb_000246_130 Hb_031089_020 Hb_031089_020 Hb_084147_010--Hb_031089_020 Hb_003470_110 Hb_003470_110 Hb_084147_010--Hb_003470_110 Hb_030565_100 Hb_030565_100 Hb_084147_010--Hb_030565_100 Hb_019516_060--Hb_000246_130 Hb_000030_130 Hb_000030_130 Hb_019516_060--Hb_000030_130 Hb_000820_110 Hb_000820_110 Hb_019516_060--Hb_000820_110 Hb_003462_040 Hb_003462_040 Hb_019516_060--Hb_003462_040 Hb_006750_010 Hb_006750_010 Hb_019516_060--Hb_006750_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.81266 8.66609 14.443 39.9582 0.21601 0.855817
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.5808 1.60425 3.24704 2.79058 17.7158

CAGE analysis