Hb_012395_170

Information

Type -
Description -
Location Contig12395: 86530-91534
Sequence    

Annotation

kegg
ID rcu:RCOM_1217550
description hypothetical protein
nr
ID XP_002528358.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID A8KBE0
description Oxidation resistance protein 1 OS=Xenopus tropicalis GN=oxr1 PE=2 SV=2
trembl
ID B9SQT9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1217550 PE=4 SV=1
Gene Ontology
ID GO:0005622
description oxidation resistance protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07278: 86873-91465 , PASA_asmbl_07279: 86564-91463
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012395_170 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_005276_060 0.0455912727 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
3 Hb_084247_010 0.0612745111 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003617_020 0.0778112874 - - PREDICTED: uncharacterized protein LOC105638179 [Jatropha curcas]
5 Hb_003929_170 0.0797345463 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
6 Hb_001124_010 0.0811992266 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
7 Hb_000390_250 0.0829360501 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
8 Hb_000329_230 0.0841591434 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
9 Hb_000322_070 0.0851325126 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Jatropha curcas]
10 Hb_000009_400 0.0853144441 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]
11 Hb_003929_070 0.0856499046 - - CBL-interacting serine/threonine-protein kinase 1 isoform 3 [Theobroma cacao]
12 Hb_002028_210 0.0878947148 - - PREDICTED: uncharacterized protein LOC105638038 [Jatropha curcas]
13 Hb_001863_360 0.0895518043 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
14 Hb_001016_050 0.0905874303 - - drought-inducible protein [Manihot esculenta]
15 Hb_000567_190 0.0906733024 - - PREDICTED: protein SCAR3 isoform X2 [Jatropha curcas]
16 Hb_001087_030 0.0932032542 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
17 Hb_000370_020 0.0942995916 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001473_160 0.0949789476 - - Vesicle-associated membrane protein, putative [Ricinus communis]
19 Hb_000635_040 0.0955847089 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
20 Hb_030827_020 0.0961095029 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]

Gene co-expression network

sample Hb_012395_170 Hb_012395_170 Hb_005276_060 Hb_005276_060 Hb_012395_170--Hb_005276_060 Hb_084247_010 Hb_084247_010 Hb_012395_170--Hb_084247_010 Hb_003617_020 Hb_003617_020 Hb_012395_170--Hb_003617_020 Hb_003929_170 Hb_003929_170 Hb_012395_170--Hb_003929_170 Hb_001124_010 Hb_001124_010 Hb_012395_170--Hb_001124_010 Hb_000390_250 Hb_000390_250 Hb_012395_170--Hb_000390_250 Hb_005276_060--Hb_084247_010 Hb_000009_400 Hb_000009_400 Hb_005276_060--Hb_000009_400 Hb_001016_050 Hb_001016_050 Hb_005276_060--Hb_001016_050 Hb_005276_060--Hb_003617_020 Hb_005276_060--Hb_003929_170 Hb_005162_090 Hb_005162_090 Hb_084247_010--Hb_005162_090 Hb_084247_010--Hb_001124_010 Hb_003929_070 Hb_003929_070 Hb_084247_010--Hb_003929_070 Hb_013575_010 Hb_013575_010 Hb_084247_010--Hb_013575_010 Hb_000329_230 Hb_000329_230 Hb_003617_020--Hb_000329_230 Hb_001357_040 Hb_001357_040 Hb_003617_020--Hb_001357_040 Hb_000322_070 Hb_000322_070 Hb_003617_020--Hb_000322_070 Hb_000072_120 Hb_000072_120 Hb_003617_020--Hb_000072_120 Hb_001087_030 Hb_001087_030 Hb_003929_170--Hb_001087_030 Hb_000046_570 Hb_000046_570 Hb_003929_170--Hb_000046_570 Hb_000207_150 Hb_000207_150 Hb_003929_170--Hb_000207_150 Hb_003929_170--Hb_000009_400 Hb_003929_170--Hb_000390_250 Hb_000107_230 Hb_000107_230 Hb_003929_170--Hb_000107_230 Hb_016467_010 Hb_016467_010 Hb_001124_010--Hb_016467_010 Hb_001761_120 Hb_001761_120 Hb_001124_010--Hb_001761_120 Hb_002073_200 Hb_002073_200 Hb_001124_010--Hb_002073_200 Hb_164010_040 Hb_164010_040 Hb_001124_010--Hb_164010_040 Hb_000390_250--Hb_000046_570 Hb_000390_250--Hb_000329_230 Hb_001863_360 Hb_001863_360 Hb_000390_250--Hb_001863_360 Hb_005381_020 Hb_005381_020 Hb_000390_250--Hb_005381_020 Hb_001366_090 Hb_001366_090 Hb_000390_250--Hb_001366_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.66202 7.62699 8.73824 13.2874 6.32934 7.95633
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.65566 7.05698 7.89557 4.15552 7.27196

CAGE analysis