Hb_012395_240

Information

Type -
Description -
Location Contig12395: 120477-123145
Sequence    

Annotation

kegg
ID rcu:RCOM_1217350
description o-linked n-acetylglucosamine transferase, ogt, putative
nr
ID XP_012077607.1
description PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KEB3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12872 PE=4 SV=1
Gene Ontology
ID GO:0005622
description o-linked n-acetylglucosamine

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07289: 120495-121597 , PASA_asmbl_07290: 121765-122621 , PASA_asmbl_07291: 122659-123051
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012395_240 0.0 - - PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
2 Hb_004635_120 0.0639877471 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
3 Hb_000538_090 0.0662252227 transcription factor TF Family: NAC hypothetical protein RCOM_1603380 [Ricinus communis]
4 Hb_006816_380 0.069887444 - - PREDICTED: kinesin-4-like [Jatropha curcas]
5 Hb_000928_030 0.073433827 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
6 Hb_000000_390 0.0767889511 - - PREDICTED: uncharacterized protein LOC105633753 [Jatropha curcas]
7 Hb_189208_070 0.0803475795 - - 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
8 Hb_143629_180 0.0832707122 transcription factor TF Family: MYB myb family transcription factor family protein [Populus trichocarpa]
9 Hb_000058_180 0.0854275566 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
10 Hb_000922_200 0.0884387377 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0012s08280g [Populus trichocarpa]
11 Hb_001638_200 0.0896421945 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 43 [Jatropha curcas]
12 Hb_052530_020 0.0908519188 - - cytochrome B5 isoform 1, putative [Ricinus communis]
13 Hb_002078_330 0.0962933591 - - lipid binding protein, putative [Ricinus communis]
14 Hb_000028_190 0.09700296 - - PREDICTED: probable inactive receptor kinase At1g48480 [Jatropha curcas]
15 Hb_032920_020 0.0976107818 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
16 Hb_000915_170 0.0981334681 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
17 Hb_051663_010 0.0984962126 - - receptor-kinase, putative [Ricinus communis]
18 Hb_000599_150 0.099301589 - - PREDICTED: probable arabinose 5-phosphate isomerase [Jatropha curcas]
19 Hb_004137_040 0.0997818809 - - PREDICTED: serine carboxypeptidase-like 42 [Jatropha curcas]
20 Hb_005337_100 0.1005874343 - - PREDICTED: uncharacterized protein LOC105629349 [Jatropha curcas]

Gene co-expression network

sample Hb_012395_240 Hb_012395_240 Hb_004635_120 Hb_004635_120 Hb_012395_240--Hb_004635_120 Hb_000538_090 Hb_000538_090 Hb_012395_240--Hb_000538_090 Hb_006816_380 Hb_006816_380 Hb_012395_240--Hb_006816_380 Hb_000928_030 Hb_000928_030 Hb_012395_240--Hb_000928_030 Hb_000000_390 Hb_000000_390 Hb_012395_240--Hb_000000_390 Hb_189208_070 Hb_189208_070 Hb_012395_240--Hb_189208_070 Hb_001638_200 Hb_001638_200 Hb_004635_120--Hb_001638_200 Hb_000156_110 Hb_000156_110 Hb_004635_120--Hb_000156_110 Hb_004635_120--Hb_000538_090 Hb_004635_120--Hb_000000_390 Hb_032920_020 Hb_032920_020 Hb_004635_120--Hb_032920_020 Hb_000538_090--Hb_000000_390 Hb_002078_330 Hb_002078_330 Hb_000538_090--Hb_002078_330 Hb_000058_180 Hb_000058_180 Hb_000538_090--Hb_000058_180 Hb_008147_020 Hb_008147_020 Hb_000538_090--Hb_008147_020 Hb_143629_180 Hb_143629_180 Hb_000538_090--Hb_143629_180 Hb_000915_170 Hb_000915_170 Hb_006816_380--Hb_000915_170 Hb_000358_260 Hb_000358_260 Hb_006816_380--Hb_000358_260 Hb_006816_380--Hb_000928_030 Hb_052530_020 Hb_052530_020 Hb_006816_380--Hb_052530_020 Hb_000103_200 Hb_000103_200 Hb_006816_380--Hb_000103_200 Hb_000028_190 Hb_000028_190 Hb_000928_030--Hb_000028_190 Hb_004137_040 Hb_004137_040 Hb_000928_030--Hb_004137_040 Hb_000928_030--Hb_052530_020 Hb_002221_060 Hb_002221_060 Hb_000928_030--Hb_002221_060 Hb_000928_030--Hb_000103_200 Hb_000928_030--Hb_000358_260 Hb_051663_010 Hb_051663_010 Hb_000000_390--Hb_051663_010 Hb_000000_390--Hb_002078_330 Hb_000000_390--Hb_001638_200 Hb_001158_130 Hb_001158_130 Hb_189208_070--Hb_001158_130 Hb_012098_100 Hb_012098_100 Hb_189208_070--Hb_012098_100 Hb_189208_070--Hb_000538_090 Hb_000881_020 Hb_000881_020 Hb_189208_070--Hb_000881_020 Hb_009588_010 Hb_009588_010 Hb_189208_070--Hb_009588_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0325541 0.391101 9.69026 9.55552 0.0101596 0.0105397
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0246761 0.0194153 0.0734682 0.123687 9.25019

CAGE analysis