Hb_012518_060

Information

Type -
Description -
Location Contig12518: 43252-45347
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012518_060 0.0 - - -
2 Hb_012150_070 0.2222652932 - - hypothetical protein JCGZ_04984 [Jatropha curcas]
3 Hb_002609_100 0.2310043925 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
4 Hb_000580_060 0.2319487665 - - PREDICTED: uncharacterized protein LOC105643127 [Jatropha curcas]
5 Hb_007382_040 0.2396479244 - - uncharacterized LOC105644857 [Jatropha curcas]
6 Hb_004534_020 0.2425687765 - - PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
7 Hb_017111_010 0.2432328062 - - PREDICTED: inositol transporter 4 [Jatropha curcas]
8 Hb_001178_020 0.2483120778 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 3 [Jatropha curcas]
9 Hb_040506_010 0.251126501 - - protein binding protein, putative [Ricinus communis]
10 Hb_004254_040 0.2532947378 - - PREDICTED: uncharacterized protein LOC105650678 [Jatropha curcas]
11 Hb_000441_230 0.2541574973 - - unnamed protein product [Coffea canephora]
12 Hb_004307_040 0.2544151684 - - -
13 Hb_007634_020 0.2566630979 - - -
14 Hb_003360_020 0.2569471296 - - hypothetical protein POPTR_0016s07860g [Populus trichocarpa]
15 Hb_001892_160 0.2575706469 - - PREDICTED: MLP-like protein 28-like [Citrus sinensis]
16 Hb_171554_020 0.259174716 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
17 Hb_000613_020 0.2592009118 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
18 Hb_002796_030 0.2616156867 - - -
19 Hb_003859_010 0.2635466443 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
20 Hb_002026_230 0.2636957113 - - hypothetical protein [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_012518_060 Hb_012518_060 Hb_012150_070 Hb_012150_070 Hb_012518_060--Hb_012150_070 Hb_002609_100 Hb_002609_100 Hb_012518_060--Hb_002609_100 Hb_000580_060 Hb_000580_060 Hb_012518_060--Hb_000580_060 Hb_007382_040 Hb_007382_040 Hb_012518_060--Hb_007382_040 Hb_004534_020 Hb_004534_020 Hb_012518_060--Hb_004534_020 Hb_017111_010 Hb_017111_010 Hb_012518_060--Hb_017111_010 Hb_012150_070--Hb_002609_100 Hb_002026_230 Hb_002026_230 Hb_012150_070--Hb_002026_230 Hb_000018_160 Hb_000018_160 Hb_012150_070--Hb_000018_160 Hb_005568_070 Hb_005568_070 Hb_012150_070--Hb_005568_070 Hb_012150_070--Hb_000580_060 Hb_004307_040 Hb_004307_040 Hb_012150_070--Hb_004307_040 Hb_002609_100--Hb_002026_230 Hb_002609_100--Hb_007382_040 Hb_000613_020 Hb_000613_020 Hb_002609_100--Hb_000613_020 Hb_030414_050 Hb_030414_050 Hb_002609_100--Hb_030414_050 Hb_003050_090 Hb_003050_090 Hb_002609_100--Hb_003050_090 Hb_010290_020 Hb_010290_020 Hb_000580_060--Hb_010290_020 Hb_000441_230 Hb_000441_230 Hb_000580_060--Hb_000441_230 Hb_000580_060--Hb_004307_040 Hb_000454_030 Hb_000454_030 Hb_000580_060--Hb_000454_030 Hb_003360_020 Hb_003360_020 Hb_000580_060--Hb_003360_020 Hb_000580_060--Hb_005568_070 Hb_001259_030 Hb_001259_030 Hb_007382_040--Hb_001259_030 Hb_007382_040--Hb_003050_090 Hb_007382_040--Hb_000613_020 Hb_060437_010 Hb_060437_010 Hb_007382_040--Hb_060437_010 Hb_004254_040 Hb_004254_040 Hb_007382_040--Hb_004254_040 Hb_003859_010 Hb_003859_010 Hb_004534_020--Hb_003859_010 Hb_137543_010 Hb_137543_010 Hb_004534_020--Hb_137543_010 Hb_004534_020--Hb_007382_040 Hb_001565_100 Hb_001565_100 Hb_004534_020--Hb_001565_100 Hb_004534_020--Hb_002609_100 Hb_166786_030 Hb_166786_030 Hb_004534_020--Hb_166786_030 Hb_000186_100 Hb_000186_100 Hb_017111_010--Hb_000186_100 Hb_000523_020 Hb_000523_020 Hb_017111_010--Hb_000523_020 Hb_002388_060 Hb_002388_060 Hb_017111_010--Hb_002388_060 Hb_003687_200 Hb_003687_200 Hb_017111_010--Hb_003687_200 Hb_007545_210 Hb_007545_210 Hb_017111_010--Hb_007545_210 Hb_126669_010 Hb_126669_010 Hb_017111_010--Hb_126669_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.31315 0.128204 0 0 0.55869 0.786443
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.332023 0 0 0 0

CAGE analysis