Hb_012545_090

Information

Type -
Description -
Location Contig12545: 61072-68684
Sequence    

Annotation

kegg
ID rcu:RCOM_1591880
description acylamino-acid-releasing enzyme, putative (EC:3.4.19.1)
nr
ID KDP38395.1
description hypothetical protein JCGZ_04320 [Jatropha curcas]
swissprot
ID P34422
description Dipeptidyl peptidase family member 6 OS=Caenorhabditis elegans GN=dpf-6 PE=3 SV=2
trembl
ID A0A067L1N2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04320 PE=4 SV=1
Gene Ontology
ID GO:0005829
description acylamino-acid-releasing isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07819: 61062-68576
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012545_090 0.0 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
2 Hb_000227_040 0.0954154966 - - Stem-specific protein TSJT1, putative [Ricinus communis]
3 Hb_008226_070 0.1232425648 - - PREDICTED: expansin-A8 [Jatropha curcas]
4 Hb_012760_040 0.1400210526 - - PREDICTED: aconitate hydratase 1 [Jatropha curcas]
5 Hb_004129_050 0.1419239253 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
6 Hb_000702_060 0.1430787308 - - conserved hypothetical protein [Ricinus communis]
7 Hb_009732_020 0.1456548698 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
8 Hb_006846_120 0.1469068527 - - Succinate/fumarate mitochondrial transporter, putative [Ricinus communis]
9 Hb_003813_120 0.147159478 - - zinc finger protein, putative [Ricinus communis]
10 Hb_127886_010 0.1503589639 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
11 Hb_003226_120 0.1512715915 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000347_110 0.1532686813 - - BnaA05g25330D [Brassica napus]
13 Hb_000144_120 0.1536851688 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_002539_010 0.1553051365 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
15 Hb_007441_280 0.1554213085 - - hypothetical protein JCGZ_14672 [Jatropha curcas]
16 Hb_002539_020 0.1560424819 - - hypothetical protein CISIN_1g007216mg [Citrus sinensis]
17 Hb_011287_010 0.1562462593 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_000041_060 0.1568436307 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
19 Hb_006141_030 0.1595401412 - - -
20 Hb_001500_070 0.1649615847 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_012545_090 Hb_012545_090 Hb_000227_040 Hb_000227_040 Hb_012545_090--Hb_000227_040 Hb_008226_070 Hb_008226_070 Hb_012545_090--Hb_008226_070 Hb_012760_040 Hb_012760_040 Hb_012545_090--Hb_012760_040 Hb_004129_050 Hb_004129_050 Hb_012545_090--Hb_004129_050 Hb_000702_060 Hb_000702_060 Hb_012545_090--Hb_000702_060 Hb_009732_020 Hb_009732_020 Hb_012545_090--Hb_009732_020 Hb_000227_040--Hb_009732_020 Hb_011287_010 Hb_011287_010 Hb_000227_040--Hb_011287_010 Hb_000395_220 Hb_000395_220 Hb_000227_040--Hb_000395_220 Hb_001780_150 Hb_001780_150 Hb_000227_040--Hb_001780_150 Hb_000227_040--Hb_012760_040 Hb_000159_120 Hb_000159_120 Hb_008226_070--Hb_000159_120 Hb_012022_080 Hb_012022_080 Hb_008226_070--Hb_012022_080 Hb_008226_070--Hb_012760_040 Hb_003226_120 Hb_003226_120 Hb_008226_070--Hb_003226_120 Hb_000190_090 Hb_000190_090 Hb_008226_070--Hb_000190_090 Hb_001221_020 Hb_001221_020 Hb_008226_070--Hb_001221_020 Hb_042474_010 Hb_042474_010 Hb_012760_040--Hb_042474_010 Hb_000144_120 Hb_000144_120 Hb_012760_040--Hb_000144_120 Hb_012760_040--Hb_000190_090 Hb_006916_110 Hb_006916_110 Hb_012760_040--Hb_006916_110 Hb_082741_010 Hb_082741_010 Hb_012760_040--Hb_082741_010 Hb_000244_280 Hb_000244_280 Hb_004129_050--Hb_000244_280 Hb_000041_060 Hb_000041_060 Hb_004129_050--Hb_000041_060 Hb_004129_050--Hb_009732_020 Hb_006717_070 Hb_006717_070 Hb_004129_050--Hb_006717_070 Hb_003626_050 Hb_003626_050 Hb_004129_050--Hb_003626_050 Hb_000684_360 Hb_000684_360 Hb_000702_060--Hb_000684_360 Hb_053575_020 Hb_053575_020 Hb_000702_060--Hb_053575_020 Hb_000337_010 Hb_000337_010 Hb_000702_060--Hb_000337_010 Hb_000347_110 Hb_000347_110 Hb_000702_060--Hb_000347_110 Hb_000702_060--Hb_001780_150 Hb_005181_180 Hb_005181_180 Hb_000702_060--Hb_005181_180 Hb_009732_020--Hb_000395_220 Hb_003906_170 Hb_003906_170 Hb_009732_020--Hb_003906_170 Hb_009732_020--Hb_006717_070 Hb_005333_050 Hb_005333_050 Hb_009732_020--Hb_005333_050 Hb_003849_240 Hb_003849_240 Hb_009732_020--Hb_003849_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.22081 13.7816 14.0226 22.1135 4.16053 6.17579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.49065 6.35945 12.2982 63.8447 12.3115

CAGE analysis