Hb_012565_070

Information

Type -
Description -
Location Contig12565: 42954-49183
Sequence    

Annotation

kegg
ID tcc:TCM_019386
description Alpha/beta-Hydrolases superfamily protein isoform 1
nr
ID XP_012078010.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
swissprot
ID Q6DEY3
description Alpha/beta hydrolase domain-containing protein 17B OS=Xenopus tropicalis GN=abhd17b PE=2 SV=1
trembl
ID A0A067KMF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13025 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta hydrolase domain-containing protein 17b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07833: 42996-49282
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012565_070 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
2 Hb_000300_260 0.0670885908 - - PREDICTED: replication factor C subunit 3 [Jatropha curcas]
3 Hb_003848_040 0.0712767818 - - PREDICTED: phosphatidylinositol-glycan biosynthesis class X protein isoform X1 [Jatropha curcas]
4 Hb_000457_180 0.0735864243 - - PREDICTED: cytochrome c1-2, heme protein, mitochondrial [Jatropha curcas]
5 Hb_001863_380 0.0757306662 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
6 Hb_002307_180 0.0780014198 - - PREDICTED: rRNA-processing protein EFG1 isoform X2 [Jatropha curcas]
7 Hb_001105_170 0.0786488467 - - PREDICTED: uncharacterized protein LOC105642727 isoform X1 [Jatropha curcas]
8 Hb_000580_020 0.0797801322 - - unnamed protein product [Vitis vinifera]
9 Hb_000599_260 0.079799412 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
10 Hb_000193_110 0.0817941347 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]
11 Hb_002946_190 0.0821346921 - - PREDICTED: nudix hydrolase 26, chloroplastic [Jatropha curcas]
12 Hb_000270_310 0.0845535463 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Populus euphratica]
13 Hb_004041_020 0.0871514603 - - ATP synthase D chain, mitochondrial, putative [Ricinus communis]
14 Hb_008225_090 0.0872574186 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Jatropha curcas]
15 Hb_000270_470 0.0883944747 transcription factor TF Family: E2F-DP PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Jatropha curcas]
16 Hb_001341_150 0.0885161614 - - PREDICTED: proteasome subunit beta type-4-like [Jatropha curcas]
17 Hb_000373_050 0.0887664577 - - PREDICTED: protein WHI3 [Jatropha curcas]
18 Hb_002163_050 0.0898382309 - - hypothetical protein POPTR_0014s15490g [Populus trichocarpa]
19 Hb_000633_020 0.0901175788 - - PREDICTED: uncharacterized protein LOC105630002 [Jatropha curcas]
20 Hb_001931_010 0.0902984714 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_012565_070 Hb_012565_070 Hb_000300_260 Hb_000300_260 Hb_012565_070--Hb_000300_260 Hb_003848_040 Hb_003848_040 Hb_012565_070--Hb_003848_040 Hb_000457_180 Hb_000457_180 Hb_012565_070--Hb_000457_180 Hb_001863_380 Hb_001863_380 Hb_012565_070--Hb_001863_380 Hb_002307_180 Hb_002307_180 Hb_012565_070--Hb_002307_180 Hb_001105_170 Hb_001105_170 Hb_012565_070--Hb_001105_170 Hb_004312_010 Hb_004312_010 Hb_000300_260--Hb_004312_010 Hb_000173_310 Hb_000173_310 Hb_000300_260--Hb_000173_310 Hb_003213_010 Hb_003213_010 Hb_000300_260--Hb_003213_010 Hb_001723_150 Hb_001723_150 Hb_000300_260--Hb_001723_150 Hb_000086_170 Hb_000086_170 Hb_000300_260--Hb_000086_170 Hb_003848_040--Hb_001105_170 Hb_012340_090 Hb_012340_090 Hb_003848_040--Hb_012340_090 Hb_003207_180 Hb_003207_180 Hb_003848_040--Hb_003207_180 Hb_003848_040--Hb_000300_260 Hb_001472_100 Hb_001472_100 Hb_003848_040--Hb_001472_100 Hb_001341_150 Hb_001341_150 Hb_000457_180--Hb_001341_150 Hb_003362_030 Hb_003362_030 Hb_000457_180--Hb_003362_030 Hb_008071_020 Hb_008071_020 Hb_000457_180--Hb_008071_020 Hb_001279_080 Hb_001279_080 Hb_000457_180--Hb_001279_080 Hb_150651_040 Hb_150651_040 Hb_000457_180--Hb_150651_040 Hb_000413_240 Hb_000413_240 Hb_001863_380--Hb_000413_240 Hb_002946_190 Hb_002946_190 Hb_001863_380--Hb_002946_190 Hb_002343_040 Hb_002343_040 Hb_001863_380--Hb_002343_040 Hb_000373_050 Hb_000373_050 Hb_001863_380--Hb_000373_050 Hb_002759_190 Hb_002759_190 Hb_001863_380--Hb_002759_190 Hb_000690_190 Hb_000690_190 Hb_002307_180--Hb_000690_190 Hb_000599_260 Hb_000599_260 Hb_002307_180--Hb_000599_260 Hb_000270_310 Hb_000270_310 Hb_002307_180--Hb_000270_310 Hb_000270_470 Hb_000270_470 Hb_002307_180--Hb_000270_470 Hb_032202_100 Hb_032202_100 Hb_002307_180--Hb_032202_100 Hb_001105_170--Hb_012340_090 Hb_001105_170--Hb_002343_040 Hb_001105_170--Hb_001863_380 Hb_001105_170--Hb_000300_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.4978 25.3764 51.4424 30.51 19.2393 20.0691
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.835 53.3262 23.807 18.3191 22.7818

CAGE analysis