Hb_012573_080

Information

Type -
Description -
Location Contig12573: 66293-69281
Sequence    

Annotation

kegg
ID rcu:RCOM_0222500
description Mitochondrial deoxynucleotide carrier, putative
nr
ID KDP32386.1
description hypothetical protein JCGZ_13311 [Jatropha curcas]
swissprot
ID Q9SUV1
description Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1
trembl
ID A0A067K819
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13311 PE=3 SV=1
Gene Ontology
ID GO:0009941
description adenine nucleotide transporter chloroplastic mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07872: 66463-68927 , PASA_asmbl_07873: 69155-69274
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012573_080 0.0 - - hypothetical protein JCGZ_13311 [Jatropha curcas]
2 Hb_000987_140 0.097963895 - - PREDICTED: uncharacterized protein LOC105648083 isoform X1 [Jatropha curcas]
3 Hb_042038_020 0.1239257257 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Jatropha curcas]
4 Hb_001123_290 0.132633367 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3 [Jatropha curcas]
5 Hb_000140_070 0.1381493488 - - PREDICTED: uncharacterized protein LOC105642935 isoform X1 [Jatropha curcas]
6 Hb_164010_070 0.138713729 - - Paramyosin, putative [Ricinus communis]
7 Hb_001049_030 0.1415026452 - - catalytic, putative [Ricinus communis]
8 Hb_093084_070 0.1441549825 desease resistance Gene Name: Baculo_PEP_C Disease resistance protein RPP13, putative [Ricinus communis]
9 Hb_000832_030 0.1460465426 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105634915 [Jatropha curcas]
10 Hb_000327_280 0.1468672847 - - PREDICTED: uncharacterized protein LOC105635045 isoform X1 [Jatropha curcas]
11 Hb_006683_040 0.1474299852 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
12 Hb_000665_010 0.1491390758 - - hypothetical protein 20 [Hevea brasiliensis]
13 Hb_003373_040 0.1552440049 - - hypothetical protein ARALYDRAFT_356474 [Arabidopsis lyrata subsp. lyrata]
14 Hb_009564_030 0.1564086154 transcription factor TF Family: bHLH Transcription factor AtMYC2, putative [Ricinus communis]
15 Hb_001769_010 0.1571535472 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000336_140 0.1573557877 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000680_050 0.1574031027 - - hypothetical protein JCGZ_24767 [Jatropha curcas]
18 Hb_012807_050 0.1578866824 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
19 Hb_000941_130 0.1582464114 - - gamma-tubulin complex component, putative [Ricinus communis]
20 Hb_000525_010 0.1591041628 - - ring finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_012573_080 Hb_012573_080 Hb_000987_140 Hb_000987_140 Hb_012573_080--Hb_000987_140 Hb_042038_020 Hb_042038_020 Hb_012573_080--Hb_042038_020 Hb_001123_290 Hb_001123_290 Hb_012573_080--Hb_001123_290 Hb_000140_070 Hb_000140_070 Hb_012573_080--Hb_000140_070 Hb_164010_070 Hb_164010_070 Hb_012573_080--Hb_164010_070 Hb_001049_030 Hb_001049_030 Hb_012573_080--Hb_001049_030 Hb_000836_270 Hb_000836_270 Hb_000987_140--Hb_000836_270 Hb_000987_140--Hb_042038_020 Hb_011311_020 Hb_011311_020 Hb_000987_140--Hb_011311_020 Hb_000418_070 Hb_000418_070 Hb_000987_140--Hb_000418_070 Hb_005914_150 Hb_005914_150 Hb_000987_140--Hb_005914_150 Hb_042038_020--Hb_000140_070 Hb_012807_050 Hb_012807_050 Hb_042038_020--Hb_012807_050 Hb_000865_080 Hb_000865_080 Hb_042038_020--Hb_000865_080 Hb_002188_110 Hb_002188_110 Hb_042038_020--Hb_002188_110 Hb_000959_040 Hb_000959_040 Hb_042038_020--Hb_000959_040 Hb_023827_040 Hb_023827_040 Hb_042038_020--Hb_023827_040 Hb_116086_010 Hb_116086_010 Hb_001123_290--Hb_116086_010 Hb_000175_220 Hb_000175_220 Hb_001123_290--Hb_000175_220 Hb_000322_150 Hb_000322_150 Hb_001123_290--Hb_000322_150 Hb_000832_030 Hb_000832_030 Hb_001123_290--Hb_000832_030 Hb_001864_060 Hb_001864_060 Hb_001123_290--Hb_001864_060 Hb_002005_110 Hb_002005_110 Hb_001123_290--Hb_002005_110 Hb_001059_100 Hb_001059_100 Hb_000140_070--Hb_001059_100 Hb_003373_040 Hb_003373_040 Hb_000140_070--Hb_003373_040 Hb_076693_020 Hb_076693_020 Hb_000140_070--Hb_076693_020 Hb_001220_030 Hb_001220_030 Hb_000140_070--Hb_001220_030 Hb_093084_070 Hb_093084_070 Hb_000140_070--Hb_093084_070 Hb_006847_040 Hb_006847_040 Hb_000140_070--Hb_006847_040 Hb_000340_110 Hb_000340_110 Hb_164010_070--Hb_000340_110 Hb_144824_010 Hb_144824_010 Hb_164010_070--Hb_144824_010 Hb_124677_060 Hb_124677_060 Hb_164010_070--Hb_124677_060 Hb_006683_040 Hb_006683_040 Hb_164010_070--Hb_006683_040 Hb_001053_030 Hb_001053_030 Hb_164010_070--Hb_001053_030 Hb_000932_070 Hb_000932_070 Hb_164010_070--Hb_000932_070 Hb_006573_200 Hb_006573_200 Hb_001049_030--Hb_006573_200 Hb_011218_070 Hb_011218_070 Hb_001049_030--Hb_011218_070 Hb_000077_230 Hb_000077_230 Hb_001049_030--Hb_000077_230 Hb_012395_220 Hb_012395_220 Hb_001049_030--Hb_012395_220 Hb_001049_030--Hb_042038_020 Hb_000953_010 Hb_000953_010 Hb_001049_030--Hb_000953_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.1768 36.9 4.66425 10.3987 11.075 21.3666
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.41331 8.09103 18.2175 11.0225 2.16621

CAGE analysis