Hb_012627_040

Information

Type -
Description -
Location Contig12627: 11015-21380
Sequence    

Annotation

kegg
ID rcu:RCOM_0353910
description hypothetical protein
nr
ID XP_012082037.1
description PREDICTED: uncharacterized protein LOC105641988 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18292 PE=4 SV=1
Gene Ontology
ID GO:0009507
description metallo-hydrolase oxidoreductase superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07958: 11238-21267
cDNA
(Sanger)
(ID:Location)		 025_F09.ab1: 11238-20124

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012627_040 0.0 - - PREDICTED: uncharacterized protein LOC105641988 [Jatropha curcas]
2 Hb_000120_290 0.0888948439 - - PREDICTED: N-acylphosphatidylethanolamine synthase isoform X1 [Jatropha curcas]
3 Hb_005731_160 0.0932635567 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_002811_010 0.0978795466 - - cysteine synthase, putative [Ricinus communis]
5 Hb_000282_080 0.1004430523 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002758_010 0.1052462669 - - PREDICTED: ribonuclease II, chloroplastic/mitochondrial [Populus euphratica]
7 Hb_000465_190 0.1060061512 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X2 [Jatropha curcas]
8 Hb_001195_450 0.1103907123 - - PREDICTED: uncharacterized protein LOC105633771 [Jatropha curcas]
9 Hb_000215_070 0.1126499328 - - PREDICTED: uncharacterized protein LOC105119782 isoform X1 [Populus euphratica]
10 Hb_001589_010 0.1136884078 - - PREDICTED: uncharacterized protein LOC105638192 isoform X1 [Jatropha curcas]
11 Hb_000130_220 0.1156304466 - - PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Jatropha curcas]
12 Hb_062226_060 0.1180084668 - - PREDICTED: mitochondrial substrate carrier family protein B-like [Jatropha curcas]
13 Hb_001766_050 0.1180989838 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29290 [Jatropha curcas]
14 Hb_002014_030 0.1193022448 - - hypothetical protein JCGZ_07251 [Jatropha curcas]
15 Hb_001951_220 0.1193568096 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X5 [Jatropha curcas]
16 Hb_000789_200 0.1201597567 - - mitochondrial processing peptidase alpha subunit, putative [Ricinus communis]
17 Hb_055619_010 0.1205202899 - - PREDICTED: uncharacterized protein LOC105632456 isoform X2 [Jatropha curcas]
18 Hb_002193_030 0.1208888021 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like [Jatropha curcas]
19 Hb_002205_230 0.1234200152 - - glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
20 Hb_009778_060 0.1236439274 - - PREDICTED: uncharacterized protein LOC105636987 [Jatropha curcas]

Gene co-expression network

sample Hb_012627_040 Hb_012627_040 Hb_000120_290 Hb_000120_290 Hb_012627_040--Hb_000120_290 Hb_005731_160 Hb_005731_160 Hb_012627_040--Hb_005731_160 Hb_002811_010 Hb_002811_010 Hb_012627_040--Hb_002811_010 Hb_000282_080 Hb_000282_080 Hb_012627_040--Hb_000282_080 Hb_002758_010 Hb_002758_010 Hb_012627_040--Hb_002758_010 Hb_000465_190 Hb_000465_190 Hb_012627_040--Hb_000465_190 Hb_000120_290--Hb_002811_010 Hb_000120_290--Hb_005731_160 Hb_002811_130 Hb_002811_130 Hb_000120_290--Hb_002811_130 Hb_003376_230 Hb_003376_230 Hb_000120_290--Hb_003376_230 Hb_000120_290--Hb_000465_190 Hb_005731_160--Hb_002811_010 Hb_000613_110 Hb_000613_110 Hb_005731_160--Hb_000613_110 Hb_005731_160--Hb_002758_010 Hb_000130_320 Hb_000130_320 Hb_005731_160--Hb_000130_320 Hb_055619_010 Hb_055619_010 Hb_005731_160--Hb_055619_010 Hb_000648_040 Hb_000648_040 Hb_005731_160--Hb_000648_040 Hb_002811_010--Hb_055619_010 Hb_003106_190 Hb_003106_190 Hb_002811_010--Hb_003106_190 Hb_002811_010--Hb_000613_110 Hb_000077_150 Hb_000077_150 Hb_002811_010--Hb_000077_150 Hb_005511_140 Hb_005511_140 Hb_000282_080--Hb_005511_140 Hb_001195_450 Hb_001195_450 Hb_000282_080--Hb_001195_450 Hb_001314_080 Hb_001314_080 Hb_000282_080--Hb_001314_080 Hb_000282_080--Hb_002758_010 Hb_000023_260 Hb_000023_260 Hb_000282_080--Hb_000023_260 Hb_001080_090 Hb_001080_090 Hb_000282_080--Hb_001080_090 Hb_002758_010--Hb_000130_320 Hb_002205_230 Hb_002205_230 Hb_002758_010--Hb_002205_230 Hb_001936_090 Hb_001936_090 Hb_002758_010--Hb_001936_090 Hb_005253_030 Hb_005253_030 Hb_002758_010--Hb_005253_030 Hb_001589_010 Hb_001589_010 Hb_002758_010--Hb_001589_010 Hb_000465_190--Hb_005253_030 Hb_000465_190--Hb_002758_010 Hb_005116_050 Hb_005116_050 Hb_000465_190--Hb_005116_050 Hb_000465_190--Hb_002205_230 Hb_000340_100 Hb_000340_100 Hb_000465_190--Hb_000340_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.6297 16.5352 16.1194 16.9828 9.45924 14.0136
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.1118 27.1996 13.9879 21.0373 48.2024

CAGE analysis