Hb_012707_010

Information

Type -
Description -
Location Contig12707: 11210-12602
Sequence    

Annotation

kegg
ID rcu:RCOM_1341620
description hypothetical protein
nr
ID XP_012083067.1
description PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JWN3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14152 PE=4 SV=1
Gene Ontology
ID GO:0044710
description PREDICTED: uncharacterized protein C594.04c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012707_010 0.0 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
2 Hb_000950_030 0.116475251 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g10290 [Nelumbo nucifera]
3 Hb_000696_070 0.129998529 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]
4 Hb_001486_350 0.1308594963 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
5 Hb_000806_130 0.1333051577 - - Adenosine kinase 2 [Theobroma cacao]
6 Hb_002157_270 0.1492884164 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
7 Hb_001989_100 0.155452217 - - PREDICTED: uncharacterized protein LOC105636214 [Jatropha curcas]
8 Hb_009674_010 0.1569214885 - - AAEL007687-PA [Aedes aegypti]
9 Hb_029223_040 0.1581895285 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
10 Hb_000236_190 0.1596771838 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
11 Hb_000300_410 0.1603002729 - - hypothetical protein POPTR_0013s05860g [Populus trichocarpa]
12 Hb_005976_010 0.1607567947 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
13 Hb_004055_020 0.1646254381 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
14 Hb_000236_180 0.1726086704 - - serine hydroxymethyltransferase, putative [Ricinus communis]
15 Hb_000580_110 0.1727884617 - - PREDICTED: UDP-glucuronate 4-epimerase 3 [Jatropha curcas]
16 Hb_002781_050 0.1782797637 - - cytochrome B5 isoform 1, putative [Ricinus communis]
17 Hb_000300_420 0.1803967803 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
18 Hb_026527_010 0.1869768399 - - PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
19 Hb_001329_180 0.1871228955 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
20 Hb_000106_030 0.1879330379 - - amino acid transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_012707_010 Hb_012707_010 Hb_000950_030 Hb_000950_030 Hb_012707_010--Hb_000950_030 Hb_000696_070 Hb_000696_070 Hb_012707_010--Hb_000696_070 Hb_001486_350 Hb_001486_350 Hb_012707_010--Hb_001486_350 Hb_000806_130 Hb_000806_130 Hb_012707_010--Hb_000806_130 Hb_002157_270 Hb_002157_270 Hb_012707_010--Hb_002157_270 Hb_001989_100 Hb_001989_100 Hb_012707_010--Hb_001989_100 Hb_000950_030--Hb_002157_270 Hb_004055_020 Hb_004055_020 Hb_000950_030--Hb_004055_020 Hb_000950_030--Hb_000806_130 Hb_000950_030--Hb_001486_350 Hb_006634_110 Hb_006634_110 Hb_000950_030--Hb_006634_110 Hb_002781_050 Hb_002781_050 Hb_000696_070--Hb_002781_050 Hb_000696_070--Hb_000806_130 Hb_001119_070 Hb_001119_070 Hb_000696_070--Hb_001119_070 Hb_001369_630 Hb_001369_630 Hb_000696_070--Hb_001369_630 Hb_000696_070--Hb_001486_350 Hb_026527_010 Hb_026527_010 Hb_000696_070--Hb_026527_010 Hb_001486_350--Hb_000806_130 Hb_000236_190 Hb_000236_190 Hb_001486_350--Hb_000236_190 Hb_001486_350--Hb_002781_050 Hb_000300_420 Hb_000300_420 Hb_001486_350--Hb_000300_420 Hb_001329_180 Hb_001329_180 Hb_000806_130--Hb_001329_180 Hb_000806_130--Hb_000236_190 Hb_000806_130--Hb_001119_070 Hb_000806_130--Hb_000300_420 Hb_011310_040 Hb_011310_040 Hb_002157_270--Hb_011310_040 Hb_002129_020 Hb_002129_020 Hb_002157_270--Hb_002129_020 Hb_002596_080 Hb_002596_080 Hb_002157_270--Hb_002596_080 Hb_001493_060 Hb_001493_060 Hb_002157_270--Hb_001493_060 Hb_002164_020 Hb_002164_020 Hb_002157_270--Hb_002164_020 Hb_000300_410 Hb_000300_410 Hb_001989_100--Hb_000300_410 Hb_001989_100--Hb_000950_030 Hb_020805_140 Hb_020805_140 Hb_001989_100--Hb_020805_140 Hb_000496_110 Hb_000496_110 Hb_001989_100--Hb_000496_110 Hb_005976_010 Hb_005976_010 Hb_001989_100--Hb_005976_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.387696 0.354297 0.93251 8.58636 0.069202 0.717942
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.451522 1.06527 1.13694 2.30773 3.60847

CAGE analysis