Hb_012725_090

Information

Type -
Description -
Location Contig12725: 92758-95337
Sequence    

Annotation

kegg
ID fve:101309065
description uncharacterized protein LOC101309065
nr
ID XP_012075219.1
description PREDICTED: uncharacterized protein LOC105636535 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09395 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08334: 92711-95346
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012725_090 0.0 - - PREDICTED: uncharacterized protein LOC105636535 [Jatropha curcas]
2 Hb_000048_050 0.1316386678 - - PREDICTED: F-box/kelch-repeat protein At1g22040-like [Jatropha curcas]
3 Hb_001473_130 0.131684937 - - PREDICTED: ubiquinone biosynthesis monooxygenase COQ6 [Jatropha curcas]
4 Hb_002154_050 0.1379789163 - - RNA binding protein, putative [Ricinus communis]
5 Hb_006935_050 0.1393466121 - - PREDICTED: probable glutathione peroxidase 2 [Populus euphratica]
6 Hb_000157_010 0.1400987067 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
7 Hb_064997_010 0.1424625444 - - hypothetical protein JCGZ_19852 [Jatropha curcas]
8 Hb_001999_060 0.144155297 - - hypothetical protein POPTR_0009s05000g [Populus trichocarpa]
9 Hb_023292_010 0.1451984873 - - Cucumisin precursor, putative [Ricinus communis]
10 Hb_002078_050 0.1474510354 - - PREDICTED: protein kish-like [Nicotiana tomentosiformis]
11 Hb_006602_010 0.1494071215 - - PREDICTED: tobamovirus multiplication protein 3 [Jatropha curcas]
12 Hb_001396_230 0.1501321774 - - hypothetical protein MIMGU_mgv1a023992mg, partial [Erythranthe guttata]
13 Hb_001258_080 0.1506065524 - - PREDICTED: uncharacterized protein LOC105639921 [Jatropha curcas]
14 Hb_001357_080 0.1509144658 - - hypothetical protein POPTR_0005s15590g [Populus trichocarpa]
15 Hb_005779_100 0.1514015621 - - DNAJ [Theobroma cacao]
16 Hb_001396_220 0.151793577 - - nuclear transport factor, putative [Ricinus communis]
17 Hb_008173_120 0.1518026617 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002687_050 0.1532832395 - - PREDICTED: uncharacterized protein LOC105782305 isoform X2 [Gossypium raimondii]
19 Hb_002357_040 0.1538362498 - - latex-abundant protein [Hevea brasiliensis]
20 Hb_003497_030 0.1538575337 - - ADP-ribosylation factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_012725_090 Hb_012725_090 Hb_000048_050 Hb_000048_050 Hb_012725_090--Hb_000048_050 Hb_001473_130 Hb_001473_130 Hb_012725_090--Hb_001473_130 Hb_002154_050 Hb_002154_050 Hb_012725_090--Hb_002154_050 Hb_006935_050 Hb_006935_050 Hb_012725_090--Hb_006935_050 Hb_000157_010 Hb_000157_010 Hb_012725_090--Hb_000157_010 Hb_064997_010 Hb_064997_010 Hb_012725_090--Hb_064997_010 Hb_000048_050--Hb_001473_130 Hb_002352_010 Hb_002352_010 Hb_000048_050--Hb_002352_010 Hb_084849_020 Hb_084849_020 Hb_000048_050--Hb_084849_020 Hb_001369_050 Hb_001369_050 Hb_000048_050--Hb_001369_050 Hb_002025_320 Hb_002025_320 Hb_000048_050--Hb_002025_320 Hb_004899_320 Hb_004899_320 Hb_000048_050--Hb_004899_320 Hb_001473_130--Hb_002025_320 Hb_000983_100 Hb_000983_100 Hb_001473_130--Hb_000983_100 Hb_001473_130--Hb_002352_010 Hb_002326_030 Hb_002326_030 Hb_001473_130--Hb_002326_030 Hb_002527_070 Hb_002527_070 Hb_001473_130--Hb_002527_070 Hb_000427_110 Hb_000427_110 Hb_001473_130--Hb_000427_110 Hb_005779_100 Hb_005779_100 Hb_002154_050--Hb_005779_100 Hb_005539_290 Hb_005539_290 Hb_002154_050--Hb_005539_290 Hb_006602_010 Hb_006602_010 Hb_002154_050--Hb_006602_010 Hb_006602_020 Hb_006602_020 Hb_002154_050--Hb_006602_020 Hb_002154_050--Hb_001473_130 Hb_000479_330 Hb_000479_330 Hb_002154_050--Hb_000479_330 Hb_001433_220 Hb_001433_220 Hb_006935_050--Hb_001433_220 Hb_000139_380 Hb_000139_380 Hb_006935_050--Hb_000139_380 Hb_023292_010 Hb_023292_010 Hb_006935_050--Hb_023292_010 Hb_000099_200 Hb_000099_200 Hb_006935_050--Hb_000099_200 Hb_000025_480 Hb_000025_480 Hb_006935_050--Hb_000025_480 Hb_000049_070 Hb_000049_070 Hb_006935_050--Hb_000049_070 Hb_152439_020 Hb_152439_020 Hb_000157_010--Hb_152439_020 Hb_010417_020 Hb_010417_020 Hb_000157_010--Hb_010417_020 Hb_001153_220 Hb_001153_220 Hb_000157_010--Hb_001153_220 Hb_001856_020 Hb_001856_020 Hb_000157_010--Hb_001856_020 Hb_024952_010 Hb_024952_010 Hb_000157_010--Hb_024952_010 Hb_011457_170 Hb_011457_170 Hb_000157_010--Hb_011457_170 Hb_064997_010--Hb_001153_220 Hb_003018_190 Hb_003018_190 Hb_064997_010--Hb_003018_190 Hb_000836_070 Hb_000836_070 Hb_064997_010--Hb_000836_070 Hb_000997_400 Hb_000997_400 Hb_064997_010--Hb_000997_400 Hb_008311_010 Hb_008311_010 Hb_064997_010--Hb_008311_010 Hb_025214_130 Hb_025214_130 Hb_064997_010--Hb_025214_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.4046 2.25562 0.865549 6.35657 9.50198 37.493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.2878 25.4125 37.5388 8.75931 0.930742

CAGE analysis