Hb_012743_010

Information

Type -
Description -
Location Contig12743: 17359-18969
Sequence    

Annotation

kegg
ID rcu:RCOM_1006970
description inorganic phosphate transporter, putative
nr
ID AJH76871.1
description phosphate transporter [Manihot esculenta]
swissprot
ID Q8GYF4
description Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2
trembl
ID A0A0B5WQH0
description PT1;3 protein OS=Manihot esculenta GN=PT1;3 PE=2 SV=1
Gene Ontology
ID GO:0016021
description phosphate transporter isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012743_010 0.0 - - phosphate transporter [Manihot esculenta]
2 Hb_002233_080 0.1470862632 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
3 Hb_000532_150 0.1499946896 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
4 Hb_012272_010 0.1560020995 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_001329_080 0.1581470331 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
6 Hb_076771_010 0.1612584154 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
7 Hb_001472_140 0.1694641945 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
8 Hb_001675_310 0.1724155023 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]
9 Hb_005048_120 0.173196418 - - -
10 Hb_010721_010 0.1749010238 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
11 Hb_003633_150 0.1775904107 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
12 Hb_001019_020 0.1778008989 - - conserved hypothetical protein [Ricinus communis]
13 Hb_182970_010 0.177931932 - - calmodulin-binding protein 60-D [Populus trichocarpa]
14 Hb_001430_010 0.1781985773 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
15 Hb_000210_160 0.1809489303 - - PREDICTED: protein YLS9-like [Jatropha curcas]
16 Hb_003449_030 0.1818496145 - - PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic-like [Camelina sativa]
17 Hb_000186_320 0.1849386235 - - receptor protein kinase, putative [Ricinus communis]
18 Hb_094437_050 0.1872906652 - - PREDICTED: uncharacterized protein LOC105630877 isoform X2 [Jatropha curcas]
19 Hb_001688_070 0.188847235 - - PREDICTED: L-Ala-D/L-amino acid epimerase isoform X1 [Jatropha curcas]
20 Hb_007904_290 0.189041279 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]

Gene co-expression network

sample Hb_012743_010 Hb_012743_010 Hb_002233_080 Hb_002233_080 Hb_012743_010--Hb_002233_080 Hb_000532_150 Hb_000532_150 Hb_012743_010--Hb_000532_150 Hb_012272_010 Hb_012272_010 Hb_012743_010--Hb_012272_010 Hb_001329_080 Hb_001329_080 Hb_012743_010--Hb_001329_080 Hb_076771_010 Hb_076771_010 Hb_012743_010--Hb_076771_010 Hb_001472_140 Hb_001472_140 Hb_012743_010--Hb_001472_140 Hb_001019_020 Hb_001019_020 Hb_002233_080--Hb_001019_020 Hb_002233_080--Hb_076771_010 Hb_001675_310 Hb_001675_310 Hb_002233_080--Hb_001675_310 Hb_002233_080--Hb_012272_010 Hb_004297_080 Hb_004297_080 Hb_002233_080--Hb_004297_080 Hb_094437_050 Hb_094437_050 Hb_002233_080--Hb_094437_050 Hb_001514_250 Hb_001514_250 Hb_000532_150--Hb_001514_250 Hb_001269_090 Hb_001269_090 Hb_000532_150--Hb_001269_090 Hb_000284_170 Hb_000284_170 Hb_000532_150--Hb_000284_170 Hb_113676_010 Hb_113676_010 Hb_000532_150--Hb_113676_010 Hb_000172_230 Hb_000172_230 Hb_000532_150--Hb_000172_230 Hb_005048_120 Hb_005048_120 Hb_012272_010--Hb_005048_120 Hb_010721_010 Hb_010721_010 Hb_012272_010--Hb_010721_010 Hb_007904_290 Hb_007904_290 Hb_012272_010--Hb_007904_290 Hb_012272_010--Hb_001019_020 Hb_001189_150 Hb_001189_150 Hb_012272_010--Hb_001189_150 Hb_002936_030 Hb_002936_030 Hb_012272_010--Hb_002936_030 Hb_001329_080--Hb_001472_140 Hb_000009_200 Hb_000009_200 Hb_001329_080--Hb_000009_200 Hb_005714_100 Hb_005714_100 Hb_001329_080--Hb_005714_100 Hb_007382_100 Hb_007382_100 Hb_001329_080--Hb_007382_100 Hb_182970_010 Hb_182970_010 Hb_001329_080--Hb_182970_010 Hb_056196_060 Hb_056196_060 Hb_001329_080--Hb_056196_060 Hb_002676_110 Hb_002676_110 Hb_076771_010--Hb_002676_110 Hb_001663_090 Hb_001663_090 Hb_076771_010--Hb_001663_090 Hb_029622_090 Hb_029622_090 Hb_076771_010--Hb_029622_090 Hb_000010_220 Hb_000010_220 Hb_076771_010--Hb_000010_220 Hb_076771_010--Hb_010721_010 Hb_000836_210 Hb_000836_210 Hb_001472_140--Hb_000836_210 Hb_001472_140--Hb_004297_080 Hb_008406_030 Hb_008406_030 Hb_001472_140--Hb_008406_030 Hb_002875_070 Hb_002875_070 Hb_001472_140--Hb_002875_070 Hb_005408_080 Hb_005408_080 Hb_001472_140--Hb_005408_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0850353 0.962737 0.877443 1.13748 0 0.0693484
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0863321 0 0.042649 0.144461 0.142504

CAGE analysis