Hb_012753_180

Information

Type -
Description -
Location Contig12753: 90907-93196
Sequence    

Annotation

kegg
ID pop:POPTR_0001s08880g
description POPTRDRAFT_63589; cytochrome P450 family protein
nr
ID XP_012086991.1
description PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
swissprot
ID Q7XU38
description Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3
trembl
ID A0A067JRP1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20654 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 87a3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08389: 92041-92900
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012753_180 0.0 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
2 Hb_001329_020 0.2110540076 - - PREDICTED: probable boron transporter 2 [Populus euphratica]
3 Hb_003226_130 0.2143709576 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]
4 Hb_027136_020 0.2150577711 - - -
5 Hb_021596_060 0.2400038365 - - PREDICTED: peroxidase 56-like, partial [Solanum tuberosum]
6 Hb_005227_050 0.2428300765 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000676_280 0.2441936536 - - ATP binding protein, putative [Ricinus communis]
8 Hb_119600_020 0.2550345398 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
9 Hb_005306_090 0.2595552619 - - -
10 Hb_002122_060 0.2622499148 - - PREDICTED: putative disease resistance protein RGA4 [Beta vulgaris subsp. vulgaris]
11 Hb_000984_040 0.2629708981 - - multidrug resistance pump, putative [Ricinus communis]
12 Hb_000313_280 0.2648986509 - - hypothetical protein PRUPE_ppa014856mg, partial [Prunus persica]
13 Hb_003952_080 0.2692570223 - - zinc finger protein, putative [Ricinus communis]
14 Hb_023768_020 0.2700499907 - - conserved hypothetical protein [Ricinus communis]
15 Hb_052802_010 0.2719115355 - - kinase, putative [Ricinus communis]
16 Hb_186647_010 0.2760538966 - - -
17 Hb_000358_130 0.2768702996 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
18 Hb_002820_120 0.2782894603 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
19 Hb_156850_040 0.2787914366 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
20 Hb_003536_090 0.2787992638 - - transferase, transferring glycosyl groups, putative [Ricinus communis]

Gene co-expression network

sample Hb_012753_180 Hb_012753_180 Hb_001329_020 Hb_001329_020 Hb_012753_180--Hb_001329_020 Hb_003226_130 Hb_003226_130 Hb_012753_180--Hb_003226_130 Hb_027136_020 Hb_027136_020 Hb_012753_180--Hb_027136_020 Hb_021596_060 Hb_021596_060 Hb_012753_180--Hb_021596_060 Hb_005227_050 Hb_005227_050 Hb_012753_180--Hb_005227_050 Hb_000676_280 Hb_000676_280 Hb_012753_180--Hb_000676_280 Hb_000302_100 Hb_000302_100 Hb_001329_020--Hb_000302_100 Hb_002122_060 Hb_002122_060 Hb_001329_020--Hb_002122_060 Hb_004117_330 Hb_004117_330 Hb_001329_020--Hb_004117_330 Hb_003536_090 Hb_003536_090 Hb_001329_020--Hb_003536_090 Hb_000707_040 Hb_000707_040 Hb_001329_020--Hb_000707_040 Hb_007382_130 Hb_007382_130 Hb_003226_130--Hb_007382_130 Hb_003226_130--Hb_005227_050 Hb_000313_280 Hb_000313_280 Hb_003226_130--Hb_000313_280 Hb_001810_040 Hb_001810_040 Hb_003226_130--Hb_001810_040 Hb_123301_010 Hb_123301_010 Hb_003226_130--Hb_123301_010 Hb_001097_080 Hb_001097_080 Hb_003226_130--Hb_001097_080 Hb_000181_370 Hb_000181_370 Hb_027136_020--Hb_000181_370 Hb_002582_080 Hb_002582_080 Hb_027136_020--Hb_002582_080 Hb_027136_020--Hb_001329_020 Hb_000358_130 Hb_000358_130 Hb_027136_020--Hb_000358_130 Hb_027136_020--Hb_003536_090 Hb_005306_090 Hb_005306_090 Hb_021596_060--Hb_005306_090 Hb_021596_060--Hb_000676_280 Hb_021596_060--Hb_000707_040 Hb_021596_060--Hb_001329_020 Hb_004453_190 Hb_004453_190 Hb_021596_060--Hb_004453_190 Hb_003952_080 Hb_003952_080 Hb_005227_050--Hb_003952_080 Hb_004157_060 Hb_004157_060 Hb_005227_050--Hb_004157_060 Hb_005227_050--Hb_000313_280 Hb_005227_050--Hb_001810_040 Hb_003906_150 Hb_003906_150 Hb_005227_050--Hb_003906_150 Hb_000676_280--Hb_001329_020 Hb_000236_170 Hb_000236_170 Hb_000676_280--Hb_000236_170 Hb_052802_010 Hb_052802_010 Hb_000676_280--Hb_052802_010 Hb_001804_030 Hb_001804_030 Hb_000676_280--Hb_001804_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0836119 0.315532 0.0324004 0.979782 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0637797 0.125442 0 0.050084 0

CAGE analysis