Hb_012760_120

Information

Type -
Description -
Location Contig12760: 73950-75973
Sequence    

Annotation

kegg
ID rcu:RCOM_0361190
description Peroxidase 64 precursor, putative (EC:1.11.1.7)
nr
ID XP_012088471.1
description PREDICTED: peroxidase 64-like [Jatropha curcas]
swissprot
ID Q43872
description Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1
trembl
ID A0A067JJ17
description Peroxidase OS=Jatropha curcas GN=JCGZ_25354 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 64

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08427: 73594-75886 , PASA_asmbl_08428: 73594-74866 , PASA_asmbl_08429: 74235-75886 , PASA_asmbl_08430: 74943-75123
cDNA
(Sanger)
(ID:Location)		 008_M19.ab1: 73917-74688

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012760_120 0.0 - - PREDICTED: peroxidase 64-like [Jatropha curcas]
2 Hb_011214_080 0.0830297299 - - sucrose synthase 1 [Hevea brasiliensis]
3 Hb_000538_110 0.0889306059 - - sucrose synthase 1 [Hevea brasiliensis]
4 Hb_018487_040 0.1034501716 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
5 Hb_001488_160 0.1037102377 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
6 Hb_005483_040 0.1053562567 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
7 Hb_002044_070 0.1075608321 - - Chlorophyll a-b binding protein 3, chloroplastic [Theobroma cacao]
8 Hb_001959_100 0.1094529783 - - ammonium transporter, putative [Ricinus communis]
9 Hb_002250_040 0.1126299377 - - PREDICTED: transcription repressor OFP17 [Jatropha curcas]
10 Hb_000340_240 0.1136509457 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000227_100 0.1150386294 - - PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas]
12 Hb_002329_050 0.1153608858 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002675_220 0.1155112985 - - PREDICTED: probable pyridoxal biosynthesis protein PDX1.2 [Populus euphratica]
14 Hb_003090_240 0.1157384656 - - hypothetical protein JCGZ_25095 [Jatropha curcas]
15 Hb_005675_030 0.1167050019 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
16 Hb_189208_080 0.1170134577 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 11-like isoform X1 [Jatropha curcas]
17 Hb_080048_030 0.1188161873 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
18 Hb_000739_280 0.1198306961 - - alcohol dehydrogenase, putative [Ricinus communis]
19 Hb_005062_100 0.1211816449 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
20 Hb_001104_070 0.1221923965 - - hypothetical protein SORBIDRAFT_10g024640 [Sorghum bicolor]

Gene co-expression network

sample Hb_012760_120 Hb_012760_120 Hb_011214_080 Hb_011214_080 Hb_012760_120--Hb_011214_080 Hb_000538_110 Hb_000538_110 Hb_012760_120--Hb_000538_110 Hb_018487_040 Hb_018487_040 Hb_012760_120--Hb_018487_040 Hb_001488_160 Hb_001488_160 Hb_012760_120--Hb_001488_160 Hb_005483_040 Hb_005483_040 Hb_012760_120--Hb_005483_040 Hb_002044_070 Hb_002044_070 Hb_012760_120--Hb_002044_070 Hb_011214_080--Hb_000538_110 Hb_189208_080 Hb_189208_080 Hb_011214_080--Hb_189208_080 Hb_011214_080--Hb_018487_040 Hb_002250_040 Hb_002250_040 Hb_011214_080--Hb_002250_040 Hb_002675_220 Hb_002675_220 Hb_011214_080--Hb_002675_220 Hb_001097_030 Hb_001097_030 Hb_000538_110--Hb_001097_030 Hb_005062_100 Hb_005062_100 Hb_000538_110--Hb_005062_100 Hb_002119_150 Hb_002119_150 Hb_000538_110--Hb_002119_150 Hb_000029_210 Hb_000029_210 Hb_000538_110--Hb_000029_210 Hb_018487_040--Hb_002675_220 Hb_018487_040--Hb_002250_040 Hb_001104_070 Hb_001104_070 Hb_018487_040--Hb_001104_070 Hb_018487_040--Hb_005483_040 Hb_002329_050 Hb_002329_050 Hb_018487_040--Hb_002329_050 Hb_080048_030 Hb_080048_030 Hb_018487_040--Hb_080048_030 Hb_005675_030 Hb_005675_030 Hb_001488_160--Hb_005675_030 Hb_001699_110 Hb_001699_110 Hb_001488_160--Hb_001699_110 Hb_001488_160--Hb_018487_040 Hb_011537_130 Hb_011537_130 Hb_001488_160--Hb_011537_130 Hb_001488_160--Hb_080048_030 Hb_000739_280 Hb_000739_280 Hb_001488_160--Hb_000739_280 Hb_005483_040--Hb_002329_050 Hb_005483_040--Hb_002250_040 Hb_000883_080 Hb_000883_080 Hb_005483_040--Hb_000883_080 Hb_006718_030 Hb_006718_030 Hb_005483_040--Hb_006718_030 Hb_011362_010 Hb_011362_010 Hb_005483_040--Hb_011362_010 Hb_002413_050 Hb_002413_050 Hb_002044_070--Hb_002413_050 Hb_002044_070--Hb_011537_130 Hb_029622_060 Hb_029622_060 Hb_002044_070--Hb_029622_060 Hb_002044_070--Hb_005675_030 Hb_002534_090 Hb_002534_090 Hb_002044_070--Hb_002534_090 Hb_007595_020 Hb_007595_020 Hb_002044_070--Hb_007595_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.258717 5.07294 34.3065 83.844 0.281056 0.233493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.39617 0.600204 1.49541 3.50923 233.481

CAGE analysis