Hb_012762_020

Information

Type -
Description -
Location Contig12762: 12003-16520
Sequence    

Annotation

kegg
ID rcu:RCOM_0843400
description (Di)nucleoside polyphosphate hydrolase, putative
nr
ID XP_002526025.1
description (Di)nucleoside polyphosphate hydrolase, putative [Ricinus communis]
swissprot
ID Q9C6Z2
description Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1
trembl
ID B9SJ56
description (Di)nucleoside polyphosphate hydrolase, putative OS=Ricinus communis GN=RCOM_0843400 PE=3 SV=1
Gene Ontology
ID GO:0008893
description nudix hydrolase 25

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012762_020 0.0 - - (Di)nucleoside polyphosphate hydrolase, putative [Ricinus communis]
2 Hb_004724_320 0.0763099872 - - Vesicle-associated membrane protein, putative [Ricinus communis]
3 Hb_000034_100 0.0871056343 - - dnajc14 protein, putative [Ricinus communis]
4 Hb_000220_040 0.0976933705 - - conserved hypothetical protein [Ricinus communis]
5 Hb_017491_030 0.0988793152 - - PREDICTED: 40S ribosomal protein SA-like [Jatropha curcas]
6 Hb_000275_170 0.1004407684 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]
7 Hb_002248_080 0.1005653663 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Jatropha curcas]
8 Hb_005694_110 0.1006714352 - - hypothetical protein PRUPE_ppa008137mg [Prunus persica]
9 Hb_142439_010 0.1017031227 - - PREDICTED: F-box/kelch-repeat protein OR23 [Jatropha curcas]
10 Hb_112798_020 0.1021242296 - - dnajc14 protein, putative [Ricinus communis]
11 Hb_000529_020 0.1035421649 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
12 Hb_002351_020 0.1040107582 - - PREDICTED: rRNA methyltransferase 3B, mitochondrial [Jatropha curcas]
13 Hb_000096_070 0.1046132013 - - PREDICTED: ruvB-like 2 [Jatropha curcas]
14 Hb_004310_150 0.1049798794 - - PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera]
15 Hb_005489_080 0.1055801051 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004970_090 0.1069703316 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
17 Hb_001430_120 0.1071157615 - - PREDICTED: DNA polymerase delta subunit 4 [Jatropha curcas]
18 Hb_004032_430 0.1081108281 - - PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas]
19 Hb_009775_020 0.1081316811 - - PREDICTED: vesicle transport protein GOT1B-like [Jatropha curcas]
20 Hb_010222_050 0.1087917364 - - PREDICTED: WD repeat-containing protein 48 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_012762_020 Hb_012762_020 Hb_004724_320 Hb_004724_320 Hb_012762_020--Hb_004724_320 Hb_000034_100 Hb_000034_100 Hb_012762_020--Hb_000034_100 Hb_000220_040 Hb_000220_040 Hb_012762_020--Hb_000220_040 Hb_017491_030 Hb_017491_030 Hb_012762_020--Hb_017491_030 Hb_000275_170 Hb_000275_170 Hb_012762_020--Hb_000275_170 Hb_002248_080 Hb_002248_080 Hb_012762_020--Hb_002248_080 Hb_000861_070 Hb_000861_070 Hb_004724_320--Hb_000861_070 Hb_075481_030 Hb_075481_030 Hb_004724_320--Hb_075481_030 Hb_000008_330 Hb_000008_330 Hb_004724_320--Hb_000008_330 Hb_000521_260 Hb_000521_260 Hb_004724_320--Hb_000521_260 Hb_005505_050 Hb_005505_050 Hb_004724_320--Hb_005505_050 Hb_005276_210 Hb_005276_210 Hb_000034_100--Hb_005276_210 Hb_000487_110 Hb_000487_110 Hb_000034_100--Hb_000487_110 Hb_005694_110 Hb_005694_110 Hb_000034_100--Hb_005694_110 Hb_000096_070 Hb_000096_070 Hb_000034_100--Hb_000096_070 Hb_054865_100 Hb_054865_100 Hb_000034_100--Hb_054865_100 Hb_005245_130 Hb_005245_130 Hb_000034_100--Hb_005245_130 Hb_002296_050 Hb_002296_050 Hb_000220_040--Hb_002296_050 Hb_000144_100 Hb_000144_100 Hb_000220_040--Hb_000144_100 Hb_000220_040--Hb_000275_170 Hb_003125_200 Hb_003125_200 Hb_000220_040--Hb_003125_200 Hb_004032_430 Hb_004032_430 Hb_000220_040--Hb_004032_430 Hb_000796_210 Hb_000796_210 Hb_000220_040--Hb_000796_210 Hb_004970_090 Hb_004970_090 Hb_017491_030--Hb_004970_090 Hb_112798_020 Hb_112798_020 Hb_017491_030--Hb_112798_020 Hb_002783_310 Hb_002783_310 Hb_017491_030--Hb_002783_310 Hb_005489_080 Hb_005489_080 Hb_017491_030--Hb_005489_080 Hb_003952_070 Hb_003952_070 Hb_017491_030--Hb_003952_070 Hb_001486_340 Hb_001486_340 Hb_017491_030--Hb_001486_340 Hb_000275_170--Hb_004032_430 Hb_004310_150 Hb_004310_150 Hb_000275_170--Hb_004310_150 Hb_000275_170--Hb_112798_020 Hb_000275_170--Hb_005694_110 Hb_000959_210 Hb_000959_210 Hb_000275_170--Hb_000959_210 Hb_002248_080--Hb_112798_020 Hb_000152_380 Hb_000152_380 Hb_002248_080--Hb_000152_380 Hb_002248_080--Hb_000096_070 Hb_002248_080--Hb_004310_150 Hb_000780_230 Hb_000780_230 Hb_002248_080--Hb_000780_230 Hb_031527_040 Hb_031527_040 Hb_002248_080--Hb_031527_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.03665 15.2702 7.71853 6.83378 19.9295 16.0905
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.3604 14.7806 9.98885 6.42228 5.32249

CAGE analysis