Hb_012799_040

Information

Type -
Description -
Location Contig12799: 16345-21383
Sequence    

Annotation

kegg
ID egr:104448842
description transmembrane ascorbate ferrireductase 1
nr
ID XP_012090266.1
description PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
swissprot
ID Q8L856
description Transmembrane ascorbate ferrireductase 1 OS=Arabidopsis thaliana GN=CYB561A PE=1 SV=1
trembl
ID A0A067JQL7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26116 PE=4 SV=1
Gene Ontology
ID GO:0009507
description transmembrane ascorbate ferrireductase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08630: 16383-21328 , PASA_asmbl_08631: 20559-20793
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012799_040 0.0 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
2 Hb_000656_260 0.0683025691 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
3 Hb_000032_090 0.0994142505 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004393_030 0.1061339215 - - CBL-interacting protein kinase 6 [Populus trichocarpa]
5 Hb_036492_020 0.108885878 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
6 Hb_001660_130 0.1089869656 - - PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Jatropha curcas]
7 Hb_029584_110 0.1102384704 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
8 Hb_073171_050 0.1162723339 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
9 Hb_134022_010 0.1181227522 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
10 Hb_007102_010 0.1187195849 - - Granule-bound starch synthase 1, chloroplastic/amyloplastic [Gossypium arboreum]
11 Hb_001821_050 0.1200475279 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
12 Hb_004724_300 0.1206471061 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
13 Hb_007193_030 0.1207068643 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ706 isoform X1 [Jatropha curcas]
14 Hb_008810_030 0.1220374559 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
15 Hb_000402_180 0.1236850046 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
16 Hb_007007_030 0.1245925001 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000365_340 0.1249173932 - - PREDICTED: uncharacterized protein LOC105649067 [Jatropha curcas]
18 Hb_003029_010 0.1297663971 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
19 Hb_004837_110 0.1301374186 - - PREDICTED: MATE efflux family protein 1 isoform X1 [Jatropha curcas]
20 Hb_000156_080 0.1312343123 - - Potassium channel KAT2, putative [Ricinus communis]

Gene co-expression network

sample Hb_012799_040 Hb_012799_040 Hb_000656_260 Hb_000656_260 Hb_012799_040--Hb_000656_260 Hb_000032_090 Hb_000032_090 Hb_012799_040--Hb_000032_090 Hb_004393_030 Hb_004393_030 Hb_012799_040--Hb_004393_030 Hb_036492_020 Hb_036492_020 Hb_012799_040--Hb_036492_020 Hb_001660_130 Hb_001660_130 Hb_012799_040--Hb_001660_130 Hb_029584_110 Hb_029584_110 Hb_012799_040--Hb_029584_110 Hb_000656_260--Hb_036492_020 Hb_000656_260--Hb_029584_110 Hb_006358_030 Hb_006358_030 Hb_000656_260--Hb_006358_030 Hb_000402_180 Hb_000402_180 Hb_000656_260--Hb_000402_180 Hb_002999_130 Hb_002999_130 Hb_000656_260--Hb_002999_130 Hb_000032_090--Hb_004393_030 Hb_001254_020 Hb_001254_020 Hb_000032_090--Hb_001254_020 Hb_002374_030 Hb_002374_030 Hb_000032_090--Hb_002374_030 Hb_008810_030 Hb_008810_030 Hb_000032_090--Hb_008810_030 Hb_000985_140 Hb_000985_140 Hb_000032_090--Hb_000985_140 Hb_004393_030--Hb_008810_030 Hb_021254_020 Hb_021254_020 Hb_004393_030--Hb_021254_020 Hb_004393_030--Hb_000985_140 Hb_004393_030--Hb_001660_130 Hb_007007_030 Hb_007007_030 Hb_004393_030--Hb_007007_030 Hb_036492_020--Hb_006358_030 Hb_036492_020--Hb_000402_180 Hb_134022_010 Hb_134022_010 Hb_036492_020--Hb_134022_010 Hb_003929_040 Hb_003929_040 Hb_036492_020--Hb_003929_040 Hb_152414_010 Hb_152414_010 Hb_036492_020--Hb_152414_010 Hb_002783_130 Hb_002783_130 Hb_001660_130--Hb_002783_130 Hb_001660_130--Hb_021254_020 Hb_001660_130--Hb_000402_180 Hb_001660_130--Hb_008810_030 Hb_003029_010 Hb_003029_010 Hb_029584_110--Hb_003029_010 Hb_008202_010 Hb_008202_010 Hb_029584_110--Hb_008202_010 Hb_002596_090 Hb_002596_090 Hb_029584_110--Hb_002596_090 Hb_183025_010 Hb_183025_010 Hb_029584_110--Hb_183025_010 Hb_026016_010 Hb_026016_010 Hb_029584_110--Hb_026016_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.144891 57.7479 41.3216 26.1561 0.38195 0.193653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.147438 0.077308 1.06893 4.48973 30.4184

CAGE analysis