Hb_012851_020

Information

Type -
Description -
Location Contig12851: 30202-39613
Sequence    

Annotation

kegg
ID rcu:RCOM_0228150
description p-aminobenzoate synthase, putative (EC:4.1.3.27)
nr
ID XP_012086355.1
description PREDICTED: aminodeoxychorismate synthase, chloroplastic isoform X2 [Jatropha curcas]
swissprot
ID Q6TAS3
description Aminodeoxychorismate synthase, chloroplastic OS=Solanum lycopersicum GN=ADCS PE=2 SV=1
trembl
ID A0A067L9G6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18548 PE=4 SV=1
Gene Ontology
ID GO:0009507
description aminodeoxychorismate chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012851_020 0.0 - - PREDICTED: aminodeoxychorismate synthase, chloroplastic isoform X2 [Jatropha curcas]
2 Hb_002016_140 0.1215436087 - - PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1 [Jatropha curcas]
3 Hb_000115_360 0.1274681434 - - PREDICTED: probable protein phosphatase 2C 15 isoform X3 [Jatropha curcas]
4 Hb_000622_060 0.1371145652 - - PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Jatropha curcas]
5 Hb_000560_040 0.1373901057 - - PREDICTED: membrane-associated 30 kDa protein, chloroplastic [Jatropha curcas]
6 Hb_002529_090 0.1414945436 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hevea brasiliensis]
7 Hb_002486_020 0.1443138573 - - ATP binding protein, putative [Ricinus communis]
8 Hb_000130_200 0.1480583095 - - PREDICTED: putative serine/threonine-protein kinase isoform X3 [Jatropha curcas]
9 Hb_001975_030 0.1552135443 - - 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, partial [Plectranthus barbatus]
10 Hb_000070_110 0.1562183202 - - PREDICTED: uncharacterized protein LOC105645744 isoform X1 [Jatropha curcas]
11 Hb_002397_050 0.1568930137 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
12 Hb_178968_080 0.1586291999 - - PREDICTED: serine/threonine-protein kinase OSR1 isoform X2 [Jatropha curcas]
13 Hb_003226_200 0.1591509975 - - magnesium/proton exchanger, putative [Ricinus communis]
14 Hb_002391_320 0.1593950862 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
15 Hb_000206_230 0.1600210469 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001863_070 0.160180138 - - Queuine tRNA-ribosyltransferase [Theobroma cacao]
17 Hb_004357_060 0.1603697428 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
18 Hb_000054_030 0.1617423785 - - hypothetical protein POPTR_0010s17680g [Populus trichocarpa]
19 Hb_033152_110 0.1648344461 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN3 [Jatropha curcas]
20 Hb_000008_060 0.1687677764 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_012851_020 Hb_012851_020 Hb_002016_140 Hb_002016_140 Hb_012851_020--Hb_002016_140 Hb_000115_360 Hb_000115_360 Hb_012851_020--Hb_000115_360 Hb_000622_060 Hb_000622_060 Hb_012851_020--Hb_000622_060 Hb_000560_040 Hb_000560_040 Hb_012851_020--Hb_000560_040 Hb_002529_090 Hb_002529_090 Hb_012851_020--Hb_002529_090 Hb_002486_020 Hb_002486_020 Hb_012851_020--Hb_002486_020 Hb_002391_320 Hb_002391_320 Hb_002016_140--Hb_002391_320 Hb_001329_070 Hb_001329_070 Hb_002016_140--Hb_001329_070 Hb_000589_170 Hb_000589_170 Hb_002016_140--Hb_000589_170 Hb_000753_110 Hb_000753_110 Hb_002016_140--Hb_000753_110 Hb_000206_230 Hb_000206_230 Hb_002016_140--Hb_000206_230 Hb_033152_110 Hb_033152_110 Hb_000115_360--Hb_033152_110 Hb_000115_360--Hb_000622_060 Hb_000115_360--Hb_002391_320 Hb_003226_200 Hb_003226_200 Hb_000115_360--Hb_003226_200 Hb_004129_010 Hb_004129_010 Hb_000115_360--Hb_004129_010 Hb_112064_010 Hb_112064_010 Hb_000115_360--Hb_112064_010 Hb_000130_200 Hb_000130_200 Hb_000622_060--Hb_000130_200 Hb_000622_060--Hb_033152_110 Hb_000622_060--Hb_003226_200 Hb_000032_600 Hb_000032_600 Hb_000622_060--Hb_000032_600 Hb_000622_060--Hb_004129_010 Hb_000560_040--Hb_002529_090 Hb_055690_010 Hb_055690_010 Hb_000560_040--Hb_055690_010 Hb_003440_020 Hb_003440_020 Hb_000560_040--Hb_003440_020 Hb_002075_030 Hb_002075_030 Hb_000560_040--Hb_002075_030 Hb_032631_070 Hb_032631_070 Hb_000560_040--Hb_032631_070 Hb_002053_010 Hb_002053_010 Hb_000560_040--Hb_002053_010 Hb_000070_110 Hb_000070_110 Hb_002529_090--Hb_000070_110 Hb_002529_090--Hb_003440_020 Hb_004348_040 Hb_004348_040 Hb_002529_090--Hb_004348_040 Hb_002529_090--Hb_000130_200 Hb_002232_160 Hb_002232_160 Hb_002529_090--Hb_002232_160 Hb_002284_220 Hb_002284_220 Hb_002486_020--Hb_002284_220 Hb_000110_060 Hb_000110_060 Hb_002486_020--Hb_000110_060 Hb_002759_070 Hb_002759_070 Hb_002486_020--Hb_002759_070 Hb_002486_020--Hb_003226_200 Hb_000768_150 Hb_000768_150 Hb_002486_020--Hb_000768_150 Hb_005470_030 Hb_005470_030 Hb_002486_020--Hb_005470_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.120434 0.759736 2.02823 2.08653 0.0302706 0.147907
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.2569 1.33651 0.257878 1.56342 2.78047

CAGE analysis