Hb_013394_080

Information

Type -
Description -
Location Contig13394: 82803-92573
Sequence    

Annotation

kegg
ID pop:POPTR_0013s12070g
description hypothetical protein
nr
ID XP_012075907.1
description PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X2 [Jatropha curcas]
swissprot
ID Q9XID0
description Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana GN=FAB1D PE=3 SV=1
trembl
ID A0A067KI51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11021 PE=4 SV=1
Gene Ontology
ID GO:0005524
description 1-phosphatidylinositol-3-phosphate 5-kinase fab1d

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09548: 85680-86791 , PASA_asmbl_09550: 87065-87771 , PASA_asmbl_09551: 87844-89283 , PASA_asmbl_09552: 89296-89935 , PASA_asmbl_09554: 92169-92270
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013394_080 0.0 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X2 [Jatropha curcas]
2 Hb_001894_120 0.1162375042 - - nucleoredoxin, putative [Ricinus communis]
3 Hb_003906_160 0.129402932 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Jatropha curcas]
4 Hb_002701_040 0.1296983111 - - PREDICTED: auxin transport protein BIG [Jatropha curcas]
5 Hb_011311_020 0.1304085807 - - PREDICTED: myosin-11 isoform X2 [Jatropha curcas]
6 Hb_002276_130 0.1459452998 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
7 Hb_156850_070 0.1467210335 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001019_180 0.1474371852 - - PREDICTED: uncharacterized protein LOC105639324 [Jatropha curcas]
9 Hb_002007_240 0.1478500837 - - PREDICTED: F-box protein At1g55000 [Jatropha curcas]
10 Hb_004117_310 0.1479389614 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
11 Hb_089140_030 0.1491575608 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
12 Hb_002110_030 0.1492362334 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
13 Hb_001123_290 0.1493257491 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3 [Jatropha curcas]
14 Hb_027506_020 0.1495097665 - - PREDICTED: F-box/kelch-repeat protein At1g30090 [Jatropha curcas]
15 Hb_009701_010 0.1495760969 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
16 Hb_006637_050 0.1515155791 - - PREDICTED: ethylene-insensitive protein 2 [Jatropha curcas]
17 Hb_000330_040 0.1523545467 - - PREDICTED: protein RER1B-like [Jatropha curcas]
18 Hb_006831_040 0.1528599107 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]
19 Hb_000260_070 0.1541996347 - - kinase, putative [Ricinus communis]
20 Hb_005214_090 0.1545351467 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]

Gene co-expression network

sample Hb_013394_080 Hb_013394_080 Hb_001894_120 Hb_001894_120 Hb_013394_080--Hb_001894_120 Hb_003906_160 Hb_003906_160 Hb_013394_080--Hb_003906_160 Hb_002701_040 Hb_002701_040 Hb_013394_080--Hb_002701_040 Hb_011311_020 Hb_011311_020 Hb_013394_080--Hb_011311_020 Hb_002276_130 Hb_002276_130 Hb_013394_080--Hb_002276_130 Hb_156850_070 Hb_156850_070 Hb_013394_080--Hb_156850_070 Hb_000856_180 Hb_000856_180 Hb_001894_120--Hb_000856_180 Hb_003071_020 Hb_003071_020 Hb_001894_120--Hb_003071_020 Hb_010222_070 Hb_010222_070 Hb_001894_120--Hb_010222_070 Hb_003373_030 Hb_003373_030 Hb_001894_120--Hb_003373_030 Hb_001894_120--Hb_011311_020 Hb_003906_160--Hb_002701_040 Hb_000599_190 Hb_000599_190 Hb_003906_160--Hb_000599_190 Hb_000260_070 Hb_000260_070 Hb_003906_160--Hb_000260_070 Hb_000107_420 Hb_000107_420 Hb_003906_160--Hb_000107_420 Hb_002780_010 Hb_002780_010 Hb_003906_160--Hb_002780_010 Hb_001217_050 Hb_001217_050 Hb_003906_160--Hb_001217_050 Hb_001967_030 Hb_001967_030 Hb_002701_040--Hb_001967_030 Hb_006637_050 Hb_006637_050 Hb_002701_040--Hb_006637_050 Hb_130192_030 Hb_130192_030 Hb_002701_040--Hb_130192_030 Hb_004032_380 Hb_004032_380 Hb_002701_040--Hb_004032_380 Hb_000130_040 Hb_000130_040 Hb_002701_040--Hb_000130_040 Hb_000330_040 Hb_000330_040 Hb_011311_020--Hb_000330_040 Hb_009701_010 Hb_009701_010 Hb_011311_020--Hb_009701_010 Hb_073562_010 Hb_073562_010 Hb_011311_020--Hb_073562_010 Hb_000987_140 Hb_000987_140 Hb_011311_020--Hb_000987_140 Hb_010874_020 Hb_010874_020 Hb_011311_020--Hb_010874_020 Hb_168697_010 Hb_168697_010 Hb_011311_020--Hb_168697_010 Hb_000866_170 Hb_000866_170 Hb_002276_130--Hb_000866_170 Hb_000245_040 Hb_000245_040 Hb_002276_130--Hb_000245_040 Hb_006938_080 Hb_006938_080 Hb_002276_130--Hb_006938_080 Hb_002276_130--Hb_000107_420 Hb_002276_130--Hb_010874_020 Hb_000206_240 Hb_000206_240 Hb_002276_130--Hb_000206_240 Hb_000622_250 Hb_000622_250 Hb_156850_070--Hb_000622_250 Hb_000740_110 Hb_000740_110 Hb_156850_070--Hb_000740_110 Hb_000976_040 Hb_000976_040 Hb_156850_070--Hb_000976_040 Hb_005143_030 Hb_005143_030 Hb_156850_070--Hb_005143_030 Hb_005214_090 Hb_005214_090 Hb_156850_070--Hb_005214_090 Hb_000627_180 Hb_000627_180 Hb_156850_070--Hb_000627_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.96935 8.85663 0.236887 2.66684 4.12675 4.80856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.68829 2.61099 4.52477 4.60351 1.72287

CAGE analysis