Hb_013399_020

Information

Type -
Description -
Location Contig13399: 18475-22850
Sequence    

Annotation

kegg
ID rcu:RCOM_0653410
description developmentally regulated GTP-binding protein, putative
nr
ID XP_012068896.1
description PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
swissprot
ID Q9CAI1
description Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana GN=DRG2 PE=2 SV=1
trembl
ID A0A067L0K2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24712 PE=4 SV=1
Gene Ontology
ID GO:0005525
description developmentally-regulated g-protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09564: 18172-22828 , PASA_asmbl_09565: 18172-19791
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013399_020 0.0 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
2 Hb_000170_090 0.0517877239 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
3 Hb_000923_010 0.055744908 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X1 [Jatropha curcas]
4 Hb_105328_020 0.056851649 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
5 Hb_000441_220 0.0592957952 - - PREDICTED: histidinol dehydrogenase, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_003683_020 0.059492752 - - serine/threonine protein kinase, putative [Ricinus communis]
7 Hb_093458_040 0.0600453348 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
8 Hb_002989_020 0.0607740695 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
9 Hb_003861_050 0.0615824808 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
10 Hb_004990_010 0.0634043319 - - PREDICTED: BTB/POZ and MATH domain-containing protein 4 [Jatropha curcas]
11 Hb_000138_100 0.0635255438 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]
12 Hb_006588_170 0.0637690547 - - PREDICTED: OTU domain-containing protein At3g57810 [Jatropha curcas]
13 Hb_000976_140 0.0643276561 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
14 Hb_015807_050 0.0646118743 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
15 Hb_000340_530 0.0650427908 - - hypothetical protein VITISV_016664 [Vitis vinifera]
16 Hb_004586_220 0.0651126697 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
17 Hb_001221_080 0.0655843914 - - PREDICTED: conserved oligomeric Golgi complex subunit 2 isoform X2 [Jatropha curcas]
18 Hb_000035_470 0.0657048081 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
19 Hb_001860_030 0.0662829709 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X5 [Jatropha curcas]
20 Hb_001408_140 0.0663931325 - - hypothetical protein JCGZ_00234 [Jatropha curcas]

Gene co-expression network

sample Hb_013399_020 Hb_013399_020 Hb_000170_090 Hb_000170_090 Hb_013399_020--Hb_000170_090 Hb_000923_010 Hb_000923_010 Hb_013399_020--Hb_000923_010 Hb_105328_020 Hb_105328_020 Hb_013399_020--Hb_105328_020 Hb_000441_220 Hb_000441_220 Hb_013399_020--Hb_000441_220 Hb_003683_020 Hb_003683_020 Hb_013399_020--Hb_003683_020 Hb_093458_040 Hb_093458_040 Hb_013399_020--Hb_093458_040 Hb_000170_090--Hb_105328_020 Hb_001377_310 Hb_001377_310 Hb_000170_090--Hb_001377_310 Hb_004586_220 Hb_004586_220 Hb_000170_090--Hb_004586_220 Hb_000976_140 Hb_000976_140 Hb_000170_090--Hb_000976_140 Hb_000345_160 Hb_000345_160 Hb_000170_090--Hb_000345_160 Hb_000029_300 Hb_000029_300 Hb_000923_010--Hb_000029_300 Hb_000083_120 Hb_000083_120 Hb_000923_010--Hb_000083_120 Hb_002026_210 Hb_002026_210 Hb_000923_010--Hb_002026_210 Hb_000260_330 Hb_000260_330 Hb_000923_010--Hb_000260_330 Hb_000340_530 Hb_000340_530 Hb_000923_010--Hb_000340_530 Hb_000345_380 Hb_000345_380 Hb_105328_020--Hb_000345_380 Hb_011037_030 Hb_011037_030 Hb_105328_020--Hb_011037_030 Hb_006588_170 Hb_006588_170 Hb_105328_020--Hb_006588_170 Hb_000156_010 Hb_000156_010 Hb_105328_020--Hb_000156_010 Hb_020378_030 Hb_020378_030 Hb_000441_220--Hb_020378_030 Hb_012506_030 Hb_012506_030 Hb_000441_220--Hb_012506_030 Hb_001221_080 Hb_001221_080 Hb_000441_220--Hb_001221_080 Hb_000441_220--Hb_004586_220 Hb_001205_120 Hb_001205_120 Hb_000441_220--Hb_001205_120 Hb_012498_010 Hb_012498_010 Hb_003683_020--Hb_012498_010 Hb_010142_020 Hb_010142_020 Hb_003683_020--Hb_010142_020 Hb_003528_030 Hb_003528_030 Hb_003683_020--Hb_003528_030 Hb_000159_090 Hb_000159_090 Hb_003683_020--Hb_000159_090 Hb_003683_020--Hb_000260_330 Hb_002849_130 Hb_002849_130 Hb_093458_040--Hb_002849_130 Hb_006831_140 Hb_006831_140 Hb_093458_040--Hb_006831_140 Hb_002989_020 Hb_002989_020 Hb_093458_040--Hb_002989_020 Hb_093458_040--Hb_000340_530 Hb_093458_040--Hb_000976_140 Hb_000260_350 Hb_000260_350 Hb_093458_040--Hb_000260_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.1529 20.3846 23.9743 27.6651 22.9409 24.4683
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.0367 18.1207 20.4384 25.1564 18.9156

CAGE analysis