Hb_013405_050

Information

Type -
Description -
Location Contig13405: 24941-27505
Sequence    

Annotation

kegg
ID rcu:RCOM_1335800
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_012090192.1
description PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
swissprot
ID Q9FLW0
description Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1
trembl
ID B9SB01
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_1335800 PE=3 SV=1
Gene Ontology
ID GO:0005886
description probable receptor-like protein kinase at5g24010

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013405_050 0.0 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
2 Hb_002307_100 0.0916483637 - - PREDICTED: protein transport protein sec23-1 [Jatropha curcas]
3 Hb_000031_050 0.0918734805 - - PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
4 Hb_000661_050 0.0930476385 - - PREDICTED: ankyrin repeat domain-containing protein 13C-like [Jatropha curcas]
5 Hb_004204_080 0.096809892 - - diacylglycerol kinase, theta, putative [Ricinus communis]
6 Hb_002477_160 0.0980541256 - - hypothetical protein L484_013453 [Morus notabilis]
7 Hb_001728_100 0.0999777207 - - hypothetical protein JCGZ_03429 [Jatropha curcas]
8 Hb_007757_110 0.1002315872 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
9 Hb_006573_200 0.1029124588 - - PREDICTED: pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Jatropha curcas]
10 Hb_007558_140 0.1039077784 - - PREDICTED: phospholipid-transporting ATPase 1-like [Jatropha curcas]
11 Hb_000619_080 0.1062925511 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Jatropha curcas]
12 Hb_001538_010 0.1067300221 - - -
13 Hb_000836_360 0.106757961 - - PREDICTED: uncharacterized protein LOC105642935 isoform X2 [Jatropha curcas]
14 Hb_005730_030 0.1089470635 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
15 Hb_001936_050 0.1113261312 - - PREDICTED: pentatricopeptide repeat-containing protein At4g08210-like [Prunus mume]
16 Hb_175338_030 0.1123407427 - - PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
17 Hb_004055_040 0.1136986226 - - Phospholipid-transporting ATPase, putative [Ricinus communis]
18 Hb_010222_080 0.1139231401 - - PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Jatropha curcas]
19 Hb_000244_250 0.1148189587 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 38 isoform X1 [Jatropha curcas]
20 Hb_002154_030 0.1154208651 - - RNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_013405_050 Hb_013405_050 Hb_002307_100 Hb_002307_100 Hb_013405_050--Hb_002307_100 Hb_000031_050 Hb_000031_050 Hb_013405_050--Hb_000031_050 Hb_000661_050 Hb_000661_050 Hb_013405_050--Hb_000661_050 Hb_004204_080 Hb_004204_080 Hb_013405_050--Hb_004204_080 Hb_002477_160 Hb_002477_160 Hb_013405_050--Hb_002477_160 Hb_001728_100 Hb_001728_100 Hb_013405_050--Hb_001728_100 Hb_175338_030 Hb_175338_030 Hb_002307_100--Hb_175338_030 Hb_002307_100--Hb_002477_160 Hb_007757_110 Hb_007757_110 Hb_002307_100--Hb_007757_110 Hb_010175_020 Hb_010175_020 Hb_002307_100--Hb_010175_020 Hb_002307_100--Hb_000661_050 Hb_007558_140 Hb_007558_140 Hb_002307_100--Hb_007558_140 Hb_006573_200 Hb_006573_200 Hb_000031_050--Hb_006573_200 Hb_006649_060 Hb_006649_060 Hb_000031_050--Hb_006649_060 Hb_000077_230 Hb_000077_230 Hb_000031_050--Hb_000077_230 Hb_000031_050--Hb_004204_080 Hb_000031_050--Hb_007757_110 Hb_124315_020 Hb_124315_020 Hb_000031_050--Hb_124315_020 Hb_001736_040 Hb_001736_040 Hb_000661_050--Hb_001736_040 Hb_000317_020 Hb_000317_020 Hb_000661_050--Hb_000317_020 Hb_004724_200 Hb_004724_200 Hb_000661_050--Hb_004724_200 Hb_000244_250 Hb_000244_250 Hb_000661_050--Hb_000244_250 Hb_004934_090 Hb_004934_090 Hb_000661_050--Hb_004934_090 Hb_001797_050 Hb_001797_050 Hb_004204_080--Hb_001797_050 Hb_005730_030 Hb_005730_030 Hb_004204_080--Hb_005730_030 Hb_005532_050 Hb_005532_050 Hb_004204_080--Hb_005532_050 Hb_022408_010 Hb_022408_010 Hb_004204_080--Hb_022408_010 Hb_001541_020 Hb_001541_020 Hb_004204_080--Hb_001541_020 Hb_002477_160--Hb_175338_030 Hb_002477_160--Hb_007558_140 Hb_000120_950 Hb_000120_950 Hb_002477_160--Hb_000120_950 Hb_000754_060 Hb_000754_060 Hb_002477_160--Hb_000754_060 Hb_011918_080 Hb_011918_080 Hb_002477_160--Hb_011918_080 Hb_156850_030 Hb_156850_030 Hb_001728_100--Hb_156850_030 Hb_000032_320 Hb_000032_320 Hb_001728_100--Hb_000032_320 Hb_002027_260 Hb_002027_260 Hb_001728_100--Hb_002027_260 Hb_000107_500 Hb_000107_500 Hb_001728_100--Hb_000107_500 Hb_001728_100--Hb_004204_080 Hb_000077_070 Hb_000077_070 Hb_001728_100--Hb_000077_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.2073 8.62915 2.17078 5.36045 14.8867 15.3379
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.89391 7.38274 15.9902 2.89896 4.22743

CAGE analysis