Hb_013691_040

Information

Type -
Description -
Location Contig13691: 29896-31459
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa018395mg
description hypothetical protein
nr
ID KJB07824.1
description hypothetical protein B456_001G045900 [Gossypium raimondii]
swissprot
ID Q6NMF0
description CLAVATA3/ESR (CLE)-related protein 13 OS=Arabidopsis thaliana GN=CLE13 PE=2 SV=1
trembl
ID A0A0D2PLU1
description Gossypium raimondii chromosome 1, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_001G045900 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013691_040 0.0 - - hypothetical protein B456_001G045900 [Gossypium raimondii]
2 Hb_001086_020 0.1074151263 - - hypothetical protein POPTR_0013s01730g [Populus trichocarpa]
3 Hb_000504_050 0.1107744211 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
4 Hb_000316_080 0.1197244117 - - ENTH/VHS family protein [Theobroma cacao]
5 Hb_000987_080 0.1238920017 - - light-inducible protein atls1, putative [Ricinus communis]
6 Hb_050898_010 0.1382976464 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
7 Hb_000922_290 0.1449382237 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
8 Hb_002110_210 0.1450661724 - - purine transporter, putative [Ricinus communis]
9 Hb_103541_010 0.1460428608 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
10 Hb_000563_570 0.1461220042 - - hypothetical protein JCGZ_18895 [Jatropha curcas]
11 Hb_000203_150 0.1476865244 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]
12 Hb_000090_020 0.1488468609 - - acyltransferase, putative [Ricinus communis]
13 Hb_001976_120 0.1509178573 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
14 Hb_005892_010 0.1516351167 - - PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]
15 Hb_000002_230 0.1548504828 - - RING/U-box superfamily protein [Theobroma cacao]
16 Hb_002241_020 0.1554315373 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
17 Hb_001013_060 0.1599523744 - - -
18 Hb_000036_060 0.1608054103 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
19 Hb_002053_090 0.1609828592 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001610_050 0.1611632632 - - PREDICTED: subtilisin-like protease-like [Solanum tuberosum]

Gene co-expression network

sample Hb_013691_040 Hb_013691_040 Hb_001086_020 Hb_001086_020 Hb_013691_040--Hb_001086_020 Hb_000504_050 Hb_000504_050 Hb_013691_040--Hb_000504_050 Hb_000316_080 Hb_000316_080 Hb_013691_040--Hb_000316_080 Hb_000987_080 Hb_000987_080 Hb_013691_040--Hb_000987_080 Hb_050898_010 Hb_050898_010 Hb_013691_040--Hb_050898_010 Hb_000922_290 Hb_000922_290 Hb_013691_040--Hb_000922_290 Hb_001086_020--Hb_000504_050 Hb_001086_020--Hb_000316_080 Hb_001086_020--Hb_000987_080 Hb_002110_210 Hb_002110_210 Hb_001086_020--Hb_002110_210 Hb_001610_060 Hb_001610_060 Hb_001086_020--Hb_001610_060 Hb_004218_230 Hb_004218_230 Hb_000504_050--Hb_004218_230 Hb_012879_010 Hb_012879_010 Hb_000504_050--Hb_012879_010 Hb_105446_010 Hb_105446_010 Hb_000504_050--Hb_105446_010 Hb_000751_210 Hb_000751_210 Hb_000504_050--Hb_000751_210 Hb_000504_050--Hb_002110_210 Hb_000316_080--Hb_000987_080 Hb_000316_080--Hb_000922_290 Hb_000316_080--Hb_050898_010 Hb_001823_070 Hb_001823_070 Hb_000316_080--Hb_001823_070 Hb_000316_080--Hb_002110_210 Hb_000987_080--Hb_000922_290 Hb_005892_010 Hb_005892_010 Hb_000987_080--Hb_005892_010 Hb_002241_020 Hb_002241_020 Hb_000987_080--Hb_002241_020 Hb_000987_080--Hb_002110_210 Hb_050898_010--Hb_005892_010 Hb_050898_010--Hb_000922_290 Hb_183209_020 Hb_183209_020 Hb_050898_010--Hb_183209_020 Hb_000137_030 Hb_000137_030 Hb_050898_010--Hb_000137_030 Hb_103541_010 Hb_103541_010 Hb_050898_010--Hb_103541_010 Hb_000816_050 Hb_000816_050 Hb_050898_010--Hb_000816_050 Hb_000922_290--Hb_005892_010 Hb_000007_210 Hb_000007_210 Hb_000922_290--Hb_000007_210 Hb_000656_370 Hb_000656_370 Hb_000922_290--Hb_000656_370 Hb_145139_010 Hb_145139_010 Hb_000922_290--Hb_145139_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.50841 0.0737752 4.72201 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.67154 0.565891

CAGE analysis