Hb_013691_060

Information

Type -
Description -
Location Contig13691: 66620-67114
Sequence    

Annotation

kegg
ID rcu:RCOM_1618130
description hypothetical protein
nr
ID XP_011015469.1
description PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
swissprot
ID -
description -
trembl
ID B9RE44
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1618130 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013691_060 0.0 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
2 Hb_000742_260 0.0689638342 - - hypothetical protein RCOM_1336320 [Ricinus communis]
3 Hb_005694_150 0.1063437431 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
4 Hb_000365_190 0.1096775587 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
5 Hb_000325_070 0.1175946174 - - ABC transporter family protein [Hevea brasiliensis]
6 Hb_113396_010 0.1197248032 - - cytochrome P450, putative [Ricinus communis]
7 Hb_000375_150 0.1204458138 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004218_290 0.1277769443 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
9 Hb_050847_030 0.1291412954 - - PREDICTED: cytochrome P450 714A1-like [Populus euphratica]
10 Hb_000181_390 0.1338751092 - - unknown [Lotus japonicus]
11 Hb_000024_020 0.1353077293 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
12 Hb_002004_010 0.1360896962 - - CBL-interacting protein kinase 9 [Populus trichocarpa]
13 Hb_005714_140 0.1371522119 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
14 Hb_000567_110 0.1421629758 - - hypothetical protein JCGZ_21556 [Jatropha curcas]
15 Hb_000008_170 0.1421784149 - - PREDICTED: uncharacterized protein LOC105628076 [Jatropha curcas]
16 Hb_002849_110 0.1436527028 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
17 Hb_004143_050 0.1447764427 - - PREDICTED: uncharacterized protein LOC105630712 [Jatropha curcas]
18 Hb_011101_010 0.1450297756 - - hypothetical protein JCGZ_25132 [Jatropha curcas]
19 Hb_026415_010 0.1454915104 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
20 Hb_004282_040 0.145546881 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_013691_060 Hb_013691_060 Hb_000742_260 Hb_000742_260 Hb_013691_060--Hb_000742_260 Hb_005694_150 Hb_005694_150 Hb_013691_060--Hb_005694_150 Hb_000365_190 Hb_000365_190 Hb_013691_060--Hb_000365_190 Hb_000325_070 Hb_000325_070 Hb_013691_060--Hb_000325_070 Hb_113396_010 Hb_113396_010 Hb_013691_060--Hb_113396_010 Hb_000375_150 Hb_000375_150 Hb_013691_060--Hb_000375_150 Hb_000742_260--Hb_000365_190 Hb_004143_050 Hb_004143_050 Hb_000742_260--Hb_004143_050 Hb_004218_290 Hb_004218_290 Hb_000742_260--Hb_004218_290 Hb_000742_260--Hb_113396_010 Hb_011101_010 Hb_011101_010 Hb_000742_260--Hb_011101_010 Hb_050847_030 Hb_050847_030 Hb_005694_150--Hb_050847_030 Hb_005694_150--Hb_000375_150 Hb_005694_150--Hb_000325_070 Hb_000365_340 Hb_000365_340 Hb_005694_150--Hb_000365_340 Hb_000892_030 Hb_000892_030 Hb_005694_150--Hb_000892_030 Hb_000365_190--Hb_113396_010 Hb_026048_030 Hb_026048_030 Hb_000365_190--Hb_026048_030 Hb_001310_080 Hb_001310_080 Hb_000365_190--Hb_001310_080 Hb_000365_190--Hb_011101_010 Hb_004586_230 Hb_004586_230 Hb_000365_190--Hb_004586_230 Hb_026415_010 Hb_026415_010 Hb_000325_070--Hb_026415_010 Hb_000325_070--Hb_000375_150 Hb_004879_030 Hb_004879_030 Hb_000325_070--Hb_004879_030 Hb_004724_300 Hb_004724_300 Hb_000325_070--Hb_004724_300 Hb_000015_230 Hb_000015_230 Hb_000325_070--Hb_000015_230 Hb_113396_010--Hb_001310_080 Hb_002218_080 Hb_002218_080 Hb_113396_010--Hb_002218_080 Hb_113396_010--Hb_026048_030 Hb_000024_020 Hb_000024_020 Hb_113396_010--Hb_000024_020 Hb_004112_050 Hb_004112_050 Hb_113396_010--Hb_004112_050 Hb_000329_170 Hb_000329_170 Hb_000375_150--Hb_000329_170 Hb_002725_080 Hb_002725_080 Hb_000375_150--Hb_002725_080 Hb_000181_390 Hb_000181_390 Hb_000375_150--Hb_000181_390 Hb_000375_150--Hb_050847_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.207566 79.5303 15.9346 47.6541 0.50113 1.34644
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.272907 0.214395 1.26858 2.76558 20.5948

CAGE analysis