Hb_013726_060

Information

Type transcription factor
Description TF Family: HB
Location Contig13726: 64459-70277
Sequence    

Annotation

kegg
ID pop:POPTR_0014s07130g
description POPTRDRAFT_774292; homeodomain family protein
nr
ID XP_012083470.1
description PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
swissprot
ID Q0WV12
description Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1
trembl
ID A0A067JXS1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14453 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeodomain family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10287: 64393-64535 , PASA_asmbl_10288: 64560-64733 , PASA_asmbl_10289: 64914-70241 , PASA_asmbl_10291: 68428-68931
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013726_060 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
2 Hb_000531_100 0.0374348278 - - Photosystem I reaction center subunit III, chloroplast precursor, putative [Ricinus communis]
3 Hb_146225_020 0.045658585 - - chlorophyll A/B binding protein, putative [Ricinus communis]
4 Hb_000719_030 0.0504558256 - - Photosystem I reaction center subunit III, chloroplast precursor, putative [Ricinus communis]
5 Hb_001717_060 0.0590857253 - - PREDICTED: xylogen-like protein 11 [Gossypium raimondii]
6 Hb_001766_160 0.0593334919 - - Serine/threonine-protein kinase SAPK1 [Gossypium arboreum]
7 Hb_002529_120 0.0609526124 - - PREDICTED: cyclin-dependent kinase inhibitor 7-like [Jatropha curcas]
8 Hb_002818_110 0.0616445618 transcription factor TF Family: bHLH hypothetical protein RCOM_1343120 [Ricinus communis]
9 Hb_000510_180 0.0628543484 - - unknown [Lotus japonicus]
10 Hb_001135_310 0.0639598536 - - Chlorophyll a-b binding protein 6A [Morus notabilis]
11 Hb_001292_030 0.0662582687 - - PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Jatropha curcas]
12 Hb_001751_050 0.0665748886 - - PREDICTED: phytol kinase 1, chloroplastic [Jatropha curcas]
13 Hb_008195_070 0.0677813675 - - PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X2 [Jatropha curcas]
14 Hb_000230_420 0.0678077009 - - GS [Hevea brasiliensis subsp. brasiliensis]
15 Hb_009193_020 0.0679587025 - - PREDICTED: epoxide hydrolase 3 [Jatropha curcas]
16 Hb_001675_090 0.0694284155 - - Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis]
17 Hb_001322_120 0.0696516845 - - nutrient reservoir, putative [Ricinus communis]
18 Hb_000625_080 0.0704269296 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
19 Hb_001006_150 0.0714874613 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
20 Hb_004712_220 0.0750238348 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_013726_060 Hb_013726_060 Hb_000531_100 Hb_000531_100 Hb_013726_060--Hb_000531_100 Hb_146225_020 Hb_146225_020 Hb_013726_060--Hb_146225_020 Hb_000719_030 Hb_000719_030 Hb_013726_060--Hb_000719_030 Hb_001717_060 Hb_001717_060 Hb_013726_060--Hb_001717_060 Hb_001766_160 Hb_001766_160 Hb_013726_060--Hb_001766_160 Hb_002529_120 Hb_002529_120 Hb_013726_060--Hb_002529_120 Hb_001292_030 Hb_001292_030 Hb_000531_100--Hb_001292_030 Hb_000531_100--Hb_002529_120 Hb_000230_420 Hb_000230_420 Hb_000531_100--Hb_000230_420 Hb_001322_120 Hb_001322_120 Hb_000531_100--Hb_001322_120 Hb_005276_080 Hb_005276_080 Hb_000531_100--Hb_005276_080 Hb_146225_020--Hb_000719_030 Hb_001135_310 Hb_001135_310 Hb_146225_020--Hb_001135_310 Hb_001675_090 Hb_001675_090 Hb_146225_020--Hb_001675_090 Hb_146225_020--Hb_000531_100 Hb_001571_100 Hb_001571_100 Hb_146225_020--Hb_001571_100 Hb_000719_030--Hb_001135_310 Hb_000719_030--Hb_001675_090 Hb_002818_110 Hb_002818_110 Hb_000719_030--Hb_002818_110 Hb_000719_030--Hb_001571_100 Hb_003038_060 Hb_003038_060 Hb_001717_060--Hb_003038_060 Hb_005754_050 Hb_005754_050 Hb_001717_060--Hb_005754_050 Hb_001717_060--Hb_000531_100 Hb_005280_020 Hb_005280_020 Hb_001717_060--Hb_005280_020 Hb_001717_060--Hb_002818_110 Hb_001766_160--Hb_001322_120 Hb_005649_060 Hb_005649_060 Hb_001766_160--Hb_005649_060 Hb_007477_060 Hb_007477_060 Hb_001766_160--Hb_007477_060 Hb_001766_160--Hb_000531_100 Hb_002871_180 Hb_002871_180 Hb_001766_160--Hb_002871_180 Hb_001006_150 Hb_001006_150 Hb_001766_160--Hb_001006_150 Hb_002785_030 Hb_002785_030 Hb_002529_120--Hb_002785_030 Hb_002529_120--Hb_001322_120 Hb_002529_120--Hb_001292_030 Hb_001006_040 Hb_001006_040 Hb_002529_120--Hb_001006_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.40171 34.8703 9.56382 0.00527894 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0956284 0.0470345 0 0.283284 42.8199

CAGE analysis