Hb_013726_100

Information

Type -
Description -
Location Contig13726: 97872-101672
Sequence    

Annotation

kegg
ID rcu:RCOM_1614400
description hypothetical protein
nr
ID XP_012083463.1
description PREDICTED: BON1-associated protein 2 [Jatropha curcas]
swissprot
ID Q58FX0
description BON1-associated protein 2 OS=Arabidopsis thaliana GN=BAP2 PE=1 SV=1
trembl
ID A0A067JXI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14447 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013726_100 0.0 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
2 Hb_002475_110 0.0431215895 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
3 Hb_000256_050 0.0550351996 - - chitinase, putative [Ricinus communis]
4 Hb_001623_020 0.0551214837 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
5 Hb_002572_060 0.0737064948 - - conserved hypothetical protein [Ricinus communis]
6 Hb_025477_030 0.0743796047 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
7 Hb_009683_060 0.0836320387 - - -
8 Hb_167802_010 0.0848933379 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
9 Hb_000610_030 0.0849750119 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]
10 Hb_009393_010 0.086847892 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
11 Hb_104855_020 0.0882509698 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_000904_090 0.0899234343 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
13 Hb_000227_410 0.091949576 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
14 Hb_143232_020 0.0945739989 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
15 Hb_027214_060 0.0964983887 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
16 Hb_147137_020 0.1083990177 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
17 Hb_011111_010 0.1106854758 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
18 Hb_011671_290 0.1147621949 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
19 Hb_093204_010 0.1154376522 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002486_030 0.1163968585 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_013726_100 Hb_013726_100 Hb_002475_110 Hb_002475_110 Hb_013726_100--Hb_002475_110 Hb_000256_050 Hb_000256_050 Hb_013726_100--Hb_000256_050 Hb_001623_020 Hb_001623_020 Hb_013726_100--Hb_001623_020 Hb_002572_060 Hb_002572_060 Hb_013726_100--Hb_002572_060 Hb_025477_030 Hb_025477_030 Hb_013726_100--Hb_025477_030 Hb_009683_060 Hb_009683_060 Hb_013726_100--Hb_009683_060 Hb_027214_060 Hb_027214_060 Hb_002475_110--Hb_027214_060 Hb_000227_410 Hb_000227_410 Hb_002475_110--Hb_000227_410 Hb_002475_110--Hb_025477_030 Hb_002475_110--Hb_001623_020 Hb_000904_090 Hb_000904_090 Hb_002475_110--Hb_000904_090 Hb_000256_050--Hb_001623_020 Hb_000256_050--Hb_002475_110 Hb_000256_050--Hb_002572_060 Hb_167802_010 Hb_167802_010 Hb_000256_050--Hb_167802_010 Hb_009393_010 Hb_009393_010 Hb_000256_050--Hb_009393_010 Hb_104855_020 Hb_104855_020 Hb_001623_020--Hb_104855_020 Hb_143232_020 Hb_143232_020 Hb_001623_020--Hb_143232_020 Hb_001623_020--Hb_009683_060 Hb_000959_290 Hb_000959_290 Hb_002572_060--Hb_000959_290 Hb_000610_030 Hb_000610_030 Hb_002572_060--Hb_000610_030 Hb_011671_290 Hb_011671_290 Hb_002572_060--Hb_011671_290 Hb_093204_010 Hb_093204_010 Hb_002572_060--Hb_093204_010 Hb_004994_070 Hb_004994_070 Hb_002572_060--Hb_004994_070 Hb_025477_030--Hb_009393_010 Hb_025477_030--Hb_167802_010 Hb_000134_010 Hb_000134_010 Hb_025477_030--Hb_000134_010 Hb_025477_030--Hb_000904_090 Hb_009683_060--Hb_167802_010 Hb_009683_060--Hb_104855_020 Hb_009683_060--Hb_000904_090 Hb_114932_010 Hb_114932_010 Hb_009683_060--Hb_114932_010 Hb_000338_020 Hb_000338_020 Hb_009683_060--Hb_000338_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 289.966 16.168 45.4612 0.06001 0.081947
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.107647 0.132794 0.23043 1.03364

CAGE analysis