Hb_013727_010

Information

Type -
Description -
Location Contig13727: 646-1629
Sequence    

Annotation

kegg
ID smo:SELMODRAFT_18284
description hypothetical protein
nr
ID KDP36387.1
description hypothetical protein JCGZ_08656 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJT4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08656 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013727_010 0.0 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
2 Hb_005542_020 0.0455071489 - - lupus la ribonucleoprotein, putative [Ricinus communis]
3 Hb_009268_110 0.0486633982 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
4 Hb_089491_010 0.0505712168 - - -
5 Hb_105480_010 0.0692012218 - - -
6 Hb_111332_010 0.0829138408 - - Dihydroneopterin aldolase [Morus notabilis]
7 Hb_136856_010 0.0900079652 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
8 Hb_021068_020 0.107911606 - - -
9 Hb_128173_010 0.1090493101 - - PREDICTED: uncharacterized protein LOC104219073 [Nicotiana sylvestris]
10 Hb_007761_010 0.1117412248 - - -
11 Hb_009066_010 0.1286376198 - - -
12 Hb_068347_020 0.133695721 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
13 Hb_027394_010 0.1337168525 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
14 Hb_076583_010 0.1462625474 - - hypothetical protein JCGZ_17827 [Jatropha curcas]
15 Hb_003636_050 0.1754366723 - - PREDICTED: bark storage protein A-like [Populus euphratica]
16 Hb_064951_010 0.1800748388 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
17 Hb_006692_050 0.1922002222 - - Chloroplastic lipocalin [Theobroma cacao]
18 Hb_000795_010 0.2079718087 - - -
19 Hb_013205_010 0.2099186379 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
20 Hb_130775_010 0.2163085414 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_013727_010 Hb_013727_010 Hb_005542_020 Hb_005542_020 Hb_013727_010--Hb_005542_020 Hb_009268_110 Hb_009268_110 Hb_013727_010--Hb_009268_110 Hb_089491_010 Hb_089491_010 Hb_013727_010--Hb_089491_010 Hb_105480_010 Hb_105480_010 Hb_013727_010--Hb_105480_010 Hb_111332_010 Hb_111332_010 Hb_013727_010--Hb_111332_010 Hb_136856_010 Hb_136856_010 Hb_013727_010--Hb_136856_010 Hb_005542_020--Hb_105480_010 Hb_005542_020--Hb_111332_010 Hb_128173_010 Hb_128173_010 Hb_005542_020--Hb_128173_010 Hb_007761_010 Hb_007761_010 Hb_005542_020--Hb_007761_010 Hb_005542_020--Hb_009268_110 Hb_009268_110--Hb_089491_010 Hb_009268_110--Hb_136856_010 Hb_021068_020 Hb_021068_020 Hb_009268_110--Hb_021068_020 Hb_009066_010 Hb_009066_010 Hb_009268_110--Hb_009066_010 Hb_068347_020 Hb_068347_020 Hb_009268_110--Hb_068347_020 Hb_089491_010--Hb_136856_010 Hb_089491_010--Hb_021068_020 Hb_089491_010--Hb_009066_010 Hb_089491_010--Hb_068347_020 Hb_105480_010--Hb_111332_010 Hb_105480_010--Hb_128173_010 Hb_105480_010--Hb_007761_010 Hb_105480_010--Hb_009268_110 Hb_111332_010--Hb_128173_010 Hb_111332_010--Hb_007761_010 Hb_006692_050 Hb_006692_050 Hb_111332_010--Hb_006692_050 Hb_136856_010--Hb_021068_020 Hb_136856_010--Hb_009066_010 Hb_136856_010--Hb_068347_020 Hb_027394_010 Hb_027394_010 Hb_136856_010--Hb_027394_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0377199 0.13328
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis