Hb_013749_010

Information

Type -
Description -
Location Contig13749: 1183-1515
Sequence    

Annotation

kegg
ID rcu:RCOM_0610100
description hypothetical protein
nr
ID XP_002522006.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID F4KFT7
description Probable aminopyrimidine aminohydrolase, mitochondrial OS=Arabidopsis thaliana GN=TNEA_C PE=2 SV=1
trembl
ID B9S7N7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0610100 PE=4 SV=1
Gene Ontology
ID GO:0005829
description upf0655 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013749_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001747_030 0.1482113775 - - hypothetical protein F383_08210 [Gossypium arboreum]
3 Hb_002960_130 0.156723001 - - hypothetical protein B456_008G036100 [Gossypium raimondii]
4 Hb_000683_100 0.1578754051 - - hypothetical protein JCGZ_22137 [Jatropha curcas]
5 Hb_000125_010 0.1662225862 transcription factor TF Family: mTERF -
6 Hb_129672_010 0.1672948576 - - PREDICTED: signal peptidase complex subunit 3B [Jatropha curcas]
7 Hb_089202_010 0.1674682607 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Nicotiana sylvestris]
8 Hb_133724_010 0.1689264874 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000103_250 0.1698785499 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B isoform X3 [Jatropha curcas]
10 Hb_002298_030 0.1719391382 - - PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
11 Hb_004040_030 0.1721410254 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
12 Hb_002192_090 0.1730571881 - - hypothetical protein AMTR_s00029p00055000 [Amborella trichopoda]
13 Hb_067130_010 0.1736932355 - - protein binding protein, putative [Ricinus communis]
14 Hb_001767_130 0.1779491607 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
15 Hb_000172_510 0.1779869525 - - hypothetical protein B456_007G243100 [Gossypium raimondii]
16 Hb_019181_030 0.17838262 - - PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6-like [Pyrus x bretschneideri]
17 Hb_000168_010 0.180915626 - - PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Populus euphratica]
18 Hb_001518_070 0.1811473597 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003929_270 0.1833712071 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
20 Hb_001609_040 0.1836525623 - - hypothetical protein POPTR_0017s05650g [Populus trichocarpa]

Gene co-expression network

sample Hb_013749_010 Hb_013749_010 Hb_001747_030 Hb_001747_030 Hb_013749_010--Hb_001747_030 Hb_002960_130 Hb_002960_130 Hb_013749_010--Hb_002960_130 Hb_000683_100 Hb_000683_100 Hb_013749_010--Hb_000683_100 Hb_000125_010 Hb_000125_010 Hb_013749_010--Hb_000125_010 Hb_129672_010 Hb_129672_010 Hb_013749_010--Hb_129672_010 Hb_089202_010 Hb_089202_010 Hb_013749_010--Hb_089202_010 Hb_002133_020 Hb_002133_020 Hb_001747_030--Hb_002133_020 Hb_001747_030--Hb_000125_010 Hb_000635_070 Hb_000635_070 Hb_001747_030--Hb_000635_070 Hb_072922_010 Hb_072922_010 Hb_001747_030--Hb_072922_010 Hb_000111_030 Hb_000111_030 Hb_001747_030--Hb_000111_030 Hb_001747_030--Hb_002960_130 Hb_019181_030 Hb_019181_030 Hb_002960_130--Hb_019181_030 Hb_001208_040 Hb_001208_040 Hb_002960_130--Hb_001208_040 Hb_002960_130--Hb_000683_100 Hb_001584_240 Hb_001584_240 Hb_002960_130--Hb_001584_240 Hb_000217_020 Hb_000217_020 Hb_002960_130--Hb_000217_020 Hb_001969_020 Hb_001969_020 Hb_000683_100--Hb_001969_020 Hb_000796_020 Hb_000796_020 Hb_000683_100--Hb_000796_020 Hb_148130_020 Hb_148130_020 Hb_000683_100--Hb_148130_020 Hb_010577_010 Hb_010577_010 Hb_000683_100--Hb_010577_010 Hb_091349_010 Hb_091349_010 Hb_000683_100--Hb_091349_010 Hb_082006_010 Hb_082006_010 Hb_000125_010--Hb_082006_010 Hb_002735_050 Hb_002735_050 Hb_000125_010--Hb_002735_050 Hb_003352_040 Hb_003352_040 Hb_000125_010--Hb_003352_040 Hb_002259_160 Hb_002259_160 Hb_000125_010--Hb_002259_160 Hb_001268_050 Hb_001268_050 Hb_000125_010--Hb_001268_050 Hb_001250_060 Hb_001250_060 Hb_129672_010--Hb_001250_060 Hb_000676_080 Hb_000676_080 Hb_129672_010--Hb_000676_080 Hb_129672_010--Hb_000635_070 Hb_009270_030 Hb_009270_030 Hb_129672_010--Hb_009270_030 Hb_129672_010--Hb_082006_010 Hb_086085_020 Hb_086085_020 Hb_129672_010--Hb_086085_020 Hb_004466_060 Hb_004466_060 Hb_089202_010--Hb_004466_060 Hb_000342_160 Hb_000342_160 Hb_089202_010--Hb_000342_160 Hb_000481_050 Hb_000481_050 Hb_089202_010--Hb_000481_050 Hb_003371_170 Hb_003371_170 Hb_089202_010--Hb_003371_170 Hb_000168_010 Hb_000168_010 Hb_089202_010--Hb_000168_010 Hb_000125_020 Hb_000125_020 Hb_089202_010--Hb_000125_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.92269 0.627225 2.07181 6.80276 0.364823 3.75568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.87533 2.52361 2.05808 1.7608 1.12305

CAGE analysis