Hb_013749_020

Information

Type -
Description -
Location Contig13749: 10913-26736
Sequence    

Annotation

kegg
ID rcu:RCOM_0610080
description glycogenin, putative (EC:2.4.1.186)
nr
ID XP_012089482.1
description PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
swissprot
ID Q8GWB7
description Inositol phosphorylceramide glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=IPUT1 PE=1 SV=1
trembl
ID A0A067JIR2
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_23570 PE=3 SV=1
Gene Ontology
ID GO:0003676
description inositol phosphorylceramide glucuronosyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10328: 11122-15676
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013749_020 0.0 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
2 Hb_000422_110 0.0692558429 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
3 Hb_002073_280 0.0716344544 - - PREDICTED: phospholipid-transporting ATPase 3 isoform X1 [Jatropha curcas]
4 Hb_000544_060 0.0801315627 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
5 Hb_118840_050 0.0829316916 - - hypothetical protein CISIN_1g0019781mg, partial [Citrus sinensis]
6 Hb_008406_040 0.0831962722 - - -
7 Hb_000661_200 0.0841703761 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
8 Hb_010712_090 0.0891837138 - - PREDICTED: uncharacterized protein LOC105631276 [Jatropha curcas]
9 Hb_007813_030 0.0899165713 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At4g19050 [Jatropha curcas]
10 Hb_000574_510 0.0905421033 - - protein kinase, putative [Ricinus communis]
11 Hb_000062_470 0.0910433784 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
12 Hb_012114_050 0.0921176412 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]
13 Hb_001141_370 0.0924991004 - - PREDICTED: uncharacterized protein LOC105631986 [Jatropha curcas]
14 Hb_002284_170 0.0936592048 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
15 Hb_000700_060 0.0937074413 - - PREDICTED: uncharacterized protein LOC105644416 [Jatropha curcas]
16 Hb_007193_110 0.0941996047 - - PREDICTED: E3 ubiquitin-protein ligase RNF14 [Jatropha curcas]
17 Hb_004410_070 0.0950146677 - - PREDICTED: protein LTV1 homolog [Jatropha curcas]
18 Hb_002282_060 0.0962160507 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
19 Hb_000483_380 0.099000021 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
20 Hb_000958_150 0.0998686447 - - Actin, putative [Ricinus communis]

Gene co-expression network

sample Hb_013749_020 Hb_013749_020 Hb_000422_110 Hb_000422_110 Hb_013749_020--Hb_000422_110 Hb_002073_280 Hb_002073_280 Hb_013749_020--Hb_002073_280 Hb_000544_060 Hb_000544_060 Hb_013749_020--Hb_000544_060 Hb_118840_050 Hb_118840_050 Hb_013749_020--Hb_118840_050 Hb_008406_040 Hb_008406_040 Hb_013749_020--Hb_008406_040 Hb_000661_200 Hb_000661_200 Hb_013749_020--Hb_000661_200 Hb_007813_030 Hb_007813_030 Hb_000422_110--Hb_007813_030 Hb_000422_110--Hb_002073_280 Hb_030827_060 Hb_030827_060 Hb_000422_110--Hb_030827_060 Hb_000574_510 Hb_000574_510 Hb_000422_110--Hb_000574_510 Hb_000422_110--Hb_000544_060 Hb_002282_060 Hb_002282_060 Hb_002073_280--Hb_002282_060 Hb_007576_220 Hb_007576_220 Hb_002073_280--Hb_007576_220 Hb_155159_010 Hb_155159_010 Hb_002073_280--Hb_155159_010 Hb_000526_060 Hb_000526_060 Hb_002073_280--Hb_000526_060 Hb_000896_060 Hb_000896_060 Hb_002073_280--Hb_000896_060 Hb_001141_370 Hb_001141_370 Hb_000544_060--Hb_001141_370 Hb_000544_060--Hb_000661_200 Hb_052764_060 Hb_052764_060 Hb_000544_060--Hb_052764_060 Hb_006663_040 Hb_006663_040 Hb_000544_060--Hb_006663_040 Hb_001902_060 Hb_001902_060 Hb_000544_060--Hb_001902_060 Hb_000832_320 Hb_000832_320 Hb_000544_060--Hb_000832_320 Hb_000917_160 Hb_000917_160 Hb_118840_050--Hb_000917_160 Hb_000191_130 Hb_000191_130 Hb_118840_050--Hb_000191_130 Hb_000062_470 Hb_000062_470 Hb_118840_050--Hb_000062_470 Hb_000577_030 Hb_000577_030 Hb_118840_050--Hb_000577_030 Hb_000230_430 Hb_000230_430 Hb_118840_050--Hb_000230_430 Hb_001047_200 Hb_001047_200 Hb_118840_050--Hb_001047_200 Hb_000116_510 Hb_000116_510 Hb_008406_040--Hb_000116_510 Hb_000120_420 Hb_000120_420 Hb_008406_040--Hb_000120_420 Hb_167381_020 Hb_167381_020 Hb_008406_040--Hb_167381_020 Hb_000227_310 Hb_000227_310 Hb_008406_040--Hb_000227_310 Hb_008406_040--Hb_118840_050 Hb_000661_200--Hb_052764_060 Hb_000661_200--Hb_007813_030 Hb_000661_200--Hb_000062_470 Hb_001959_020 Hb_001959_020 Hb_000661_200--Hb_001959_020 Hb_001021_200 Hb_001021_200 Hb_000661_200--Hb_001021_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.52972 13.3675 5.30584 4.91648 9.58384 5.90841
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.99717 2.37653 2.58594 4.84286 3.42785

CAGE analysis