Hb_013749_060

Information

Type -
Description -
Location Contig13749: 54858-56667
Sequence    

Annotation

kegg
ID rcu:RCOM_0609930
description hypothetical protein
nr
ID XP_012089371.1
description PREDICTED: uncharacterized protein LOC105647762 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JLT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23566 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013749_060 0.0 - - PREDICTED: uncharacterized protein LOC105647762 [Jatropha curcas]
2 Hb_057079_020 0.1180309373 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000589_220 0.1268065014 desease resistance Gene Name: NB-ARC PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
4 Hb_000236_110 0.1283271239 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic [Jatropha curcas]
5 Hb_001410_010 0.1402354745 transcription factor TF Family: RWP-RK PREDICTED: protein NLP7-like [Jatropha curcas]
6 Hb_002928_120 0.1444035912 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
7 Hb_111985_040 0.1480506594 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
8 Hb_002420_010 0.1552779413 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
9 Hb_002218_070 0.1556240364 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
10 Hb_002928_180 0.1588173292 - - catalase CAT1 [Manihot esculenta]
11 Hb_000793_040 0.1588856412 - - PREDICTED: transcription factor LHW [Jatropha curcas]
12 Hb_000778_020 0.1626597 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
13 Hb_065500_010 0.1648498889 - - -
14 Hb_053575_020 0.1713347182 - - PREDICTED: RNA-binding protein 39 [Jatropha curcas]
15 Hb_002151_100 0.1735123504 - - PREDICTED: uncharacterized protein LOC105637951 [Jatropha curcas]
16 Hb_005880_010 0.174152349 - - PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
17 Hb_010253_020 0.1756764495 - - alcohol dehydrogenase, putative [Ricinus communis]
18 Hb_003894_100 0.1769747472 - - PREDICTED: AT-hook motif nuclear-localized protein 1-like [Jatropha curcas]
19 Hb_001373_010 0.1772769448 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
20 Hb_117168_010 0.1781254764 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]

Gene co-expression network

sample Hb_013749_060 Hb_013749_060 Hb_057079_020 Hb_057079_020 Hb_013749_060--Hb_057079_020 Hb_000589_220 Hb_000589_220 Hb_013749_060--Hb_000589_220 Hb_000236_110 Hb_000236_110 Hb_013749_060--Hb_000236_110 Hb_001410_010 Hb_001410_010 Hb_013749_060--Hb_001410_010 Hb_002928_120 Hb_002928_120 Hb_013749_060--Hb_002928_120 Hb_111985_040 Hb_111985_040 Hb_013749_060--Hb_111985_040 Hb_000778_020 Hb_000778_020 Hb_057079_020--Hb_000778_020 Hb_057079_020--Hb_001410_010 Hb_011310_200 Hb_011310_200 Hb_057079_020--Hb_011310_200 Hb_008175_030 Hb_008175_030 Hb_057079_020--Hb_008175_030 Hb_010253_020 Hb_010253_020 Hb_057079_020--Hb_010253_020 Hb_000589_220--Hb_000236_110 Hb_003894_100 Hb_003894_100 Hb_000589_220--Hb_003894_100 Hb_000589_220--Hb_000778_020 Hb_000589_220--Hb_001410_010 Hb_000589_220--Hb_057079_020 Hb_002928_180 Hb_002928_180 Hb_000236_110--Hb_002928_180 Hb_002218_070 Hb_002218_070 Hb_000236_110--Hb_002218_070 Hb_000236_110--Hb_000778_020 Hb_022501_020 Hb_022501_020 Hb_000236_110--Hb_022501_020 Hb_001410_010--Hb_002218_070 Hb_001410_010--Hb_011310_200 Hb_001410_010--Hb_000236_110 Hb_001410_010--Hb_002928_180 Hb_036568_010 Hb_036568_010 Hb_001410_010--Hb_036568_010 Hb_000793_040 Hb_000793_040 Hb_002928_120--Hb_000793_040 Hb_002928_120--Hb_002928_180 Hb_001021_030 Hb_001021_030 Hb_002928_120--Hb_001021_030 Hb_025432_010 Hb_025432_010 Hb_002928_120--Hb_025432_010 Hb_000429_110 Hb_000429_110 Hb_002928_120--Hb_000429_110 Hb_002928_120--Hb_000236_110 Hb_000002_270 Hb_000002_270 Hb_111985_040--Hb_000002_270 Hb_111985_040--Hb_001410_010 Hb_000792_040 Hb_000792_040 Hb_111985_040--Hb_000792_040 Hb_002122_080 Hb_002122_080 Hb_111985_040--Hb_002122_080 Hb_001625_010 Hb_001625_010 Hb_111985_040--Hb_001625_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.45379 69.7122 6.38534 40.2181 4.34958 5.65967
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.84508 2.17233 3.97184 64.2767 35.3468

CAGE analysis