Hb_013877_020

Information

Type -
Description -
Location Contig13877: 11817-13851
Sequence    

Annotation

kegg
ID tcc:TCM_042318
description Cytochrome P450
nr
ID XP_007017115.1
description Cytochrome P450 [Theobroma cacao]
swissprot
ID Q2QYH7
description Cytochrome P450 714C2 OS=Oryza sativa subsp. japonica GN=CYP714C2 PE=2 SV=1
trembl
ID A0A061H0G3
description Cytochrome P450 OS=Theobroma cacao GN=TCM_042318 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 714c2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10604: 12592-12930
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013877_020 0.0 - - Cytochrome P450 [Theobroma cacao]
2 Hb_176844_010 0.2163567405 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_000283_120 0.2434541995 - - PREDICTED: uncharacterized protein LOC105647704 [Jatropha curcas]
4 Hb_001277_410 0.2447442137 - - PREDICTED: uncharacterized protein LOC105632036 [Jatropha curcas]
5 Hb_020549_010 0.2530971658 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
6 Hb_004619_070 0.2562749488 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
7 Hb_000270_870 0.2685748323 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
8 Hb_000815_140 0.2727761673 - - cytochrome P450, putative [Ricinus communis]
9 Hb_001865_040 0.2752128734 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
10 Hb_000982_150 0.2796469119 transcription factor TF Family: Orphans histidine kinase 1 plant, putative [Ricinus communis]
11 Hb_002843_090 0.2820398583 - - PREDICTED: CDPK-related kinase 4-like isoform X1 [Jatropha curcas]
12 Hb_001776_030 0.2832120375 - - conserved hypothetical protein [Ricinus communis]
13 Hb_013016_020 0.288706888 - - Disease resistance protein RPS2, putative [Ricinus communis]
14 Hb_087221_010 0.2892997864 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
15 Hb_005730_130 0.2914927433 - - PRA1 family protein [Theobroma cacao]
16 Hb_003598_040 0.2971179732 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-8 [Jatropha curcas]
17 Hb_001488_340 0.2986965128 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
18 Hb_002804_020 0.2991386763 - - epsin N-terminal homology domain-containing family protein [Populus trichocarpa]
19 Hb_012384_050 0.3005550689 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
20 Hb_001191_130 0.3058969216 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_013877_020 Hb_013877_020 Hb_176844_010 Hb_176844_010 Hb_013877_020--Hb_176844_010 Hb_000283_120 Hb_000283_120 Hb_013877_020--Hb_000283_120 Hb_001277_410 Hb_001277_410 Hb_013877_020--Hb_001277_410 Hb_020549_010 Hb_020549_010 Hb_013877_020--Hb_020549_010 Hb_004619_070 Hb_004619_070 Hb_013877_020--Hb_004619_070 Hb_000270_870 Hb_000270_870 Hb_013877_020--Hb_000270_870 Hb_010770_010 Hb_010770_010 Hb_176844_010--Hb_010770_010 Hb_000815_140 Hb_000815_140 Hb_176844_010--Hb_000815_140 Hb_000046_410 Hb_000046_410 Hb_176844_010--Hb_000046_410 Hb_012384_050 Hb_012384_050 Hb_176844_010--Hb_012384_050 Hb_087221_010 Hb_087221_010 Hb_176844_010--Hb_087221_010 Hb_001191_130 Hb_001191_130 Hb_000283_120--Hb_001191_130 Hb_065379_010 Hb_065379_010 Hb_000283_120--Hb_065379_010 Hb_000988_030 Hb_000988_030 Hb_000283_120--Hb_000988_030 Hb_000840_170 Hb_000840_170 Hb_000283_120--Hb_000840_170 Hb_186725_010 Hb_186725_010 Hb_000283_120--Hb_186725_010 Hb_001916_120 Hb_001916_120 Hb_001277_410--Hb_001916_120 Hb_001138_010 Hb_001138_010 Hb_001277_410--Hb_001138_010 Hb_000252_090 Hb_000252_090 Hb_001277_410--Hb_000252_090 Hb_000258_020 Hb_000258_020 Hb_001277_410--Hb_000258_020 Hb_101020_010 Hb_101020_010 Hb_001277_410--Hb_101020_010 Hb_001277_410--Hb_020549_010 Hb_000982_150 Hb_000982_150 Hb_020549_010--Hb_000982_150 Hb_001673_030 Hb_001673_030 Hb_020549_010--Hb_001673_030 Hb_020549_010--Hb_087221_010 Hb_001589_070 Hb_001589_070 Hb_020549_010--Hb_001589_070 Hb_001776_030 Hb_001776_030 Hb_004619_070--Hb_001776_030 Hb_003872_010 Hb_003872_010 Hb_004619_070--Hb_003872_010 Hb_004619_070--Hb_000270_870 Hb_000413_070 Hb_000413_070 Hb_004619_070--Hb_000413_070 Hb_004374_080 Hb_004374_080 Hb_004619_070--Hb_004374_080 Hb_002804_020 Hb_002804_020 Hb_004619_070--Hb_002804_020 Hb_000270_870--Hb_002804_020 Hb_000270_870--Hb_003872_010 Hb_000270_870--Hb_001776_030 Hb_001488_340 Hb_001488_340 Hb_000270_870--Hb_001488_340 Hb_008511_060 Hb_008511_060 Hb_000270_870--Hb_008511_060 Hb_010053_040 Hb_010053_040 Hb_000270_870--Hb_010053_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.626878 0.124941 0.174808 0.149131 0.0397506 0.15341
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0602388 0 0 0.0189091 0.0992755

CAGE analysis