Hb_014067_010

Information

Type -
Description -
Location Contig14067: 7488-11059
Sequence    

Annotation

kegg
ID pop:POPTR_0008s14260g
description POPTRDRAFT_766264; hypothetical protein
nr
ID KDP36309.1
description hypothetical protein JCGZ_09524 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KWU5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09524 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11011: 8891-9026 , PASA_asmbl_11012: 9107-11023
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014067_010 0.0 - - hypothetical protein JCGZ_09524 [Jatropha curcas]
2 Hb_004126_010 0.0739095505 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
3 Hb_000249_110 0.0947662572 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
4 Hb_138413_010 0.0947958922 - - hypothetical protein JCGZ_09524 [Jatropha curcas]
5 Hb_002843_160 0.0987684558 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Jatropha curcas]
6 Hb_005730_020 0.1015203413 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
7 Hb_009510_030 0.1019162219 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
8 Hb_002038_060 0.1028068241 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100265010 [Vitis vinifera]
9 Hb_000789_190 0.1052372236 transcription factor TF Family: NAC hypothetical protein JCGZ_07342 [Jatropha curcas]
10 Hb_003627_020 0.1072648544 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
11 Hb_007178_010 0.1072739225 - - pseudo-hevein [Hevea brasiliensis]
12 Hb_026048_090 0.108138389 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000853_370 0.1087383994 - - PREDICTED: uncharacterized protein LOC105642590 [Jatropha curcas]
14 Hb_003001_030 0.1118008547 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
15 Hb_002067_160 0.1126631377 - - Protein MLO, putative [Ricinus communis]
16 Hb_003786_110 0.113022051 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
17 Hb_026048_100 0.1166502732 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
18 Hb_066807_010 0.1179002881 - - PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
19 Hb_002200_110 0.1195492103 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000057_060 0.1199344468 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]

Gene co-expression network

sample Hb_014067_010 Hb_014067_010 Hb_004126_010 Hb_004126_010 Hb_014067_010--Hb_004126_010 Hb_000249_110 Hb_000249_110 Hb_014067_010--Hb_000249_110 Hb_138413_010 Hb_138413_010 Hb_014067_010--Hb_138413_010 Hb_002843_160 Hb_002843_160 Hb_014067_010--Hb_002843_160 Hb_005730_020 Hb_005730_020 Hb_014067_010--Hb_005730_020 Hb_009510_030 Hb_009510_030 Hb_014067_010--Hb_009510_030 Hb_004126_010--Hb_009510_030 Hb_026048_090 Hb_026048_090 Hb_004126_010--Hb_026048_090 Hb_000057_060 Hb_000057_060 Hb_004126_010--Hb_000057_060 Hb_003001_030 Hb_003001_030 Hb_004126_010--Hb_003001_030 Hb_002506_010 Hb_002506_010 Hb_004126_010--Hb_002506_010 Hb_027751_020 Hb_027751_020 Hb_000249_110--Hb_027751_020 Hb_000249_110--Hb_002843_160 Hb_002609_260 Hb_002609_260 Hb_000249_110--Hb_002609_260 Hb_004884_060 Hb_004884_060 Hb_000249_110--Hb_004884_060 Hb_000249_110--Hb_003001_030 Hb_003906_110 Hb_003906_110 Hb_000249_110--Hb_003906_110 Hb_003327_060 Hb_003327_060 Hb_138413_010--Hb_003327_060 Hb_000933_140 Hb_000933_140 Hb_138413_010--Hb_000933_140 Hb_138413_010--Hb_026048_090 Hb_003627_020 Hb_003627_020 Hb_138413_010--Hb_003627_020 Hb_002067_160 Hb_002067_160 Hb_138413_010--Hb_002067_160 Hb_002989_080 Hb_002989_080 Hb_002843_160--Hb_002989_080 Hb_000789_190 Hb_000789_190 Hb_002843_160--Hb_000789_190 Hb_002843_160--Hb_004884_060 Hb_002843_160--Hb_003906_110 Hb_005730_020--Hb_002609_260 Hb_000264_190 Hb_000264_190 Hb_005730_020--Hb_000264_190 Hb_005730_020--Hb_009510_030 Hb_005730_020--Hb_003001_030 Hb_010931_100 Hb_010931_100 Hb_005730_020--Hb_010931_100 Hb_000563_540 Hb_000563_540 Hb_005730_020--Hb_000563_540 Hb_009510_030--Hb_002506_010 Hb_009510_030--Hb_026048_090 Hb_000771_140 Hb_000771_140 Hb_009510_030--Hb_000771_140 Hb_009510_030--Hb_000057_060 Hb_009510_030--Hb_003001_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
179.654 14.3682 3.95656 7.94986 165.887 219.419
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
74.7457 106.896 141.497 12.8838 6.50943

CAGE analysis