Hb_014068_020

Information

Type -
Description -
Location Contig14068: 23756-25770
Sequence    

Annotation

kegg
ID rcu:RCOM_1440790
description transferase, transferring glycosyl groups, putative
nr
ID XP_012065127.1
description PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]
swissprot
ID Q9NS00
description Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Homo sapiens GN=C1GALT1 PE=1 SV=1
trembl
ID B9T0R4
description Transferase, transferring glycosyl groups, putative OS=Ricinus communis GN=RCOM_1440790 PE=4 SV=1
Gene Ontology
ID GO:0016740
description transferring glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014068_020 0.0 - - PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]
2 Hb_000985_070 0.2361375252 - - PREDICTED: uncharacterized protein LOC105647984 [Jatropha curcas]
3 Hb_164162_010 0.2554595378 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
4 Hb_000042_370 0.2679930697 - - conserved hypothetical protein [Ricinus communis]
5 Hb_012092_100 0.2799279167 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000000_130 0.2800633438 - - Disease resistance-responsive family protein [Theobroma cacao]
7 Hb_000125_220 0.2876182318 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 13 [Jatropha curcas]
8 Hb_006816_520 0.2924922353 - - epoxide hydrolase, putative [Ricinus communis]
9 Hb_000215_150 0.3073219872 - - PREDICTED: uncharacterized protein LOC100249186 [Vitis vinifera]
10 Hb_000925_040 0.3106381153 - - kinase, putative [Ricinus communis]
11 Hb_008878_010 0.3124226758 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 2-like [Populus euphratica]
12 Hb_000010_450 0.3179905176 - - purine permease, putative [Ricinus communis]
13 Hb_003605_140 0.3181943673 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000170_080 0.3187144376 - - PREDICTED: probable calcium-binding protein CML44 [Jatropha curcas]
15 Hb_007101_250 0.318808938 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
16 Hb_098785_010 0.321167849 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
17 Hb_000302_210 0.3263391293 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002435_010 0.3304087043 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
19 Hb_000340_070 0.3307638634 - - PREDICTED: CSC1-like protein At4g02900 [Jatropha curcas]
20 Hb_116420_050 0.3376729168 - - PREDICTED: ACT domain-containing protein ACR1 [Jatropha curcas]

Gene co-expression network

sample Hb_014068_020 Hb_014068_020 Hb_000985_070 Hb_000985_070 Hb_014068_020--Hb_000985_070 Hb_164162_010 Hb_164162_010 Hb_014068_020--Hb_164162_010 Hb_000042_370 Hb_000042_370 Hb_014068_020--Hb_000042_370 Hb_012092_100 Hb_012092_100 Hb_014068_020--Hb_012092_100 Hb_000000_130 Hb_000000_130 Hb_014068_020--Hb_000000_130 Hb_000125_220 Hb_000125_220 Hb_014068_020--Hb_000125_220 Hb_000985_070--Hb_164162_010 Hb_012754_020 Hb_012754_020 Hb_000985_070--Hb_012754_020 Hb_000302_210 Hb_000302_210 Hb_000985_070--Hb_000302_210 Hb_000985_070--Hb_000125_220 Hb_098785_010 Hb_098785_010 Hb_000985_070--Hb_098785_010 Hb_164162_010--Hb_012754_020 Hb_002045_260 Hb_002045_260 Hb_164162_010--Hb_002045_260 Hb_006478_140 Hb_006478_140 Hb_164162_010--Hb_006478_140 Hb_003751_100 Hb_003751_100 Hb_164162_010--Hb_003751_100 Hb_002374_360 Hb_002374_360 Hb_164162_010--Hb_002374_360 Hb_006788_080 Hb_006788_080 Hb_000042_370--Hb_006788_080 Hb_003747_110 Hb_003747_110 Hb_000042_370--Hb_003747_110 Hb_003799_020 Hb_003799_020 Hb_000042_370--Hb_003799_020 Hb_006816_520 Hb_006816_520 Hb_000042_370--Hb_006816_520 Hb_000042_370--Hb_000985_070 Hb_008864_100 Hb_008864_100 Hb_012092_100--Hb_008864_100 Hb_000925_040 Hb_000925_040 Hb_012092_100--Hb_000925_040 Hb_002631_190 Hb_002631_190 Hb_012092_100--Hb_002631_190 Hb_000010_300 Hb_000010_300 Hb_012092_100--Hb_000010_300 Hb_006472_070 Hb_006472_070 Hb_012092_100--Hb_006472_070 Hb_006289_020 Hb_006289_020 Hb_012092_100--Hb_006289_020 Hb_116420_050 Hb_116420_050 Hb_000000_130--Hb_116420_050 Hb_027065_010 Hb_027065_010 Hb_000000_130--Hb_027065_010 Hb_000170_080 Hb_000170_080 Hb_000000_130--Hb_000170_080 Hb_002999_150 Hb_002999_150 Hb_000000_130--Hb_002999_150 Hb_003787_050 Hb_003787_050 Hb_000000_130--Hb_003787_050 Hb_107174_010 Hb_107174_010 Hb_000000_130--Hb_107174_010 Hb_000085_390 Hb_000085_390 Hb_000125_220--Hb_000085_390 Hb_000125_220--Hb_098785_010 Hb_000125_220--Hb_000302_210 Hb_000125_220--Hb_012754_020 Hb_000125_220--Hb_012092_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0682236 0.284414 0.0218056 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0923193 0.00980685 0

CAGE analysis