Hb_014096_010

Information

Type -
Description -
Location Contig14096: 4084-5322
Sequence    

Annotation

kegg
ID rcu:RCOM_1442500
description Aspartic proteinase nepenthesin-1 precursor, putative
nr
ID XP_002512754.1
description Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
swissprot
ID Q9LHE3
description Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1
trembl
ID B9RGP5
description Aspartic proteinase nepenthesin-1, putative OS=Ricinus communis GN=RCOM_1442500 PE=4 SV=1
Gene Ontology
ID GO:0048046
description protein aspartic protease in guard cell 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014096_010 0.0 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
2 Hb_001091_010 0.1302453934 - - PREDICTED: putative disease resistance protein RGA4 isoform X2 [Malus domestica]
3 Hb_004397_010 0.1343344455 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
4 Hb_000959_150 0.1450908289 - - PREDICTED: uncharacterized protein LOC104879927 [Vitis vinifera]
5 Hb_082733_010 0.1484372194 - - hypothetical protein JCGZ_23600 [Jatropha curcas]
6 Hb_059226_020 0.1529637582 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
7 Hb_004031_060 0.1592086499 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]
8 Hb_030088_010 0.160654021 - - basic blue copper family protein [Populus trichocarpa]
9 Hb_080068_010 0.1615891957 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
10 Hb_120357_010 0.1658955035 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
11 Hb_007007_020 0.1663529456 - - conserved hypothetical protein [Ricinus communis]
12 Hb_016120_030 0.1665086905 - - hypothetical protein EUGRSUZ_D00080 [Eucalyptus grandis]
13 Hb_066207_020 0.1715986155 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
14 Hb_004241_050 0.1765093155 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
15 Hb_004926_010 0.1767289456 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
16 Hb_060236_010 0.1788142773 - - hypothetical protein JCGZ_26099 [Jatropha curcas]
17 Hb_113945_010 0.1795877571 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
18 Hb_008536_030 0.1798367273 - - hypothetical protein POPTR_0005s08290g [Populus trichocarpa]
19 Hb_000480_050 0.1800738568 - - hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris]
20 Hb_006351_040 0.1809980454 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_014096_010 Hb_014096_010 Hb_001091_010 Hb_001091_010 Hb_014096_010--Hb_001091_010 Hb_004397_010 Hb_004397_010 Hb_014096_010--Hb_004397_010 Hb_000959_150 Hb_000959_150 Hb_014096_010--Hb_000959_150 Hb_082733_010 Hb_082733_010 Hb_014096_010--Hb_082733_010 Hb_059226_020 Hb_059226_020 Hb_014096_010--Hb_059226_020 Hb_004031_060 Hb_004031_060 Hb_014096_010--Hb_004031_060 Hb_007007_020 Hb_007007_020 Hb_001091_010--Hb_007007_020 Hb_001091_010--Hb_082733_010 Hb_000421_150 Hb_000421_150 Hb_001091_010--Hb_000421_150 Hb_007101_240 Hb_007101_240 Hb_001091_010--Hb_007101_240 Hb_010681_020 Hb_010681_020 Hb_001091_010--Hb_010681_020 Hb_000483_290 Hb_000483_290 Hb_001091_010--Hb_000483_290 Hb_004397_010--Hb_059226_020 Hb_120357_010 Hb_120357_010 Hb_004397_010--Hb_120357_010 Hb_162815_010 Hb_162815_010 Hb_004397_010--Hb_162815_010 Hb_006351_040 Hb_006351_040 Hb_004397_010--Hb_006351_040 Hb_030088_010 Hb_030088_010 Hb_004397_010--Hb_030088_010 Hb_066207_020 Hb_066207_020 Hb_004397_010--Hb_066207_020 Hb_140024_010 Hb_140024_010 Hb_000959_150--Hb_140024_010 Hb_010050_010 Hb_010050_010 Hb_000959_150--Hb_010050_010 Hb_000563_620 Hb_000563_620 Hb_000959_150--Hb_000563_620 Hb_004241_050 Hb_004241_050 Hb_000959_150--Hb_004241_050 Hb_008536_030 Hb_008536_030 Hb_000959_150--Hb_008536_030 Hb_082733_010--Hb_007007_020 Hb_002413_030 Hb_002413_030 Hb_082733_010--Hb_002413_030 Hb_060236_010 Hb_060236_010 Hb_082733_010--Hb_060236_010 Hb_082733_010--Hb_059226_020 Hb_041063_010 Hb_041063_010 Hb_082733_010--Hb_041063_010 Hb_039946_040 Hb_039946_040 Hb_059226_020--Hb_039946_040 Hb_059226_020--Hb_066207_020 Hb_059226_020--Hb_030088_010 Hb_004330_060 Hb_004330_060 Hb_059226_020--Hb_004330_060 Hb_016120_030 Hb_016120_030 Hb_004031_060--Hb_016120_030 Hb_004926_010 Hb_004926_010 Hb_004031_060--Hb_004926_010 Hb_002999_010 Hb_002999_010 Hb_004031_060--Hb_002999_010 Hb_019053_050 Hb_019053_050 Hb_004031_060--Hb_019053_050 Hb_000480_050 Hb_000480_050 Hb_004031_060--Hb_000480_050 Hb_001091_040 Hb_001091_040 Hb_004031_060--Hb_001091_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.113795 0.0907628 3.50221 0.0640994 0.0328348
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.910107 0.127374

CAGE analysis