Hb_014324_010

Information

Type -
Description -
Location Contig14324: 4872-5321
Sequence    

Annotation

kegg
ID vvi:100258617
description uncharacterized LOC100258617
nr
ID KDP44108.1
description hypothetical protein JCGZ_05575 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LA50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05575 PE=4 SV=1
Gene Ontology
ID GO:0003746
description rnaligase isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014324_010 0.0 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
2 Hb_001096_020 0.1857216031 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Populus euphratica]
3 Hb_009848_050 0.1965704212 - - PREDICTED: proline-rich receptor-like protein kinase PERK13 [Elaeis guineensis]
4 Hb_049365_010 0.2131958803 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Eucalyptus grandis]
5 Hb_008033_060 0.21706621 - - PREDICTED: uncharacterized protein LOC105637564 [Jatropha curcas]
6 Hb_097021_010 0.2224372988 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
7 Hb_142570_010 0.2225117428 - - PREDICTED: uncharacterized protein LOC104907573 [Beta vulgaris subsp. vulgaris]
8 Hb_010490_060 0.2265717492 - - PREDICTED: uncharacterized protein LOC105767021 [Gossypium raimondii]
9 Hb_000260_730 0.2293441983 - - -
10 Hb_009848_060 0.2334869897 - - unknown [Glycine max]
11 Hb_069147_010 0.2349605947 desease resistance Gene Name: zf-BED PREDICTED: probable disease resistance protein At4g27220 isoform X1 [Populus euphratica]
12 Hb_057638_010 0.2376107986 - - PREDICTED: uncharacterized protein LOC105637008 [Jatropha curcas]
13 Hb_185058_020 0.2379378833 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
14 Hb_001085_210 0.2450370452 - - PREDICTED: myosin-binding protein 3 [Jatropha curcas]
15 Hb_041813_050 0.2473234176 - - hypothetical protein NitaMp096 [Nicotiana tabacum]
16 Hb_021854_020 0.2485968444 - - hypothetical protein POPTR_1763s00200g, partial [Populus trichocarpa]
17 Hb_012092_080 0.2501605492 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like [Malus domestica]
18 Hb_006594_080 0.2513501895 - - beta-glucosidase, putative [Ricinus communis]
19 Hb_004052_060 0.2523794269 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
20 Hb_172939_010 0.252937188 - - unknown [Picea sitchensis]

Gene co-expression network

sample Hb_014324_010 Hb_014324_010 Hb_001096_020 Hb_001096_020 Hb_014324_010--Hb_001096_020 Hb_009848_050 Hb_009848_050 Hb_014324_010--Hb_009848_050 Hb_049365_010 Hb_049365_010 Hb_014324_010--Hb_049365_010 Hb_008033_060 Hb_008033_060 Hb_014324_010--Hb_008033_060 Hb_097021_010 Hb_097021_010 Hb_014324_010--Hb_097021_010 Hb_142570_010 Hb_142570_010 Hb_014324_010--Hb_142570_010 Hb_001096_020--Hb_008033_060 Hb_021854_020 Hb_021854_020 Hb_001096_020--Hb_021854_020 Hb_001141_040 Hb_001141_040 Hb_001096_020--Hb_001141_040 Hb_001085_210 Hb_001085_210 Hb_001096_020--Hb_001085_210 Hb_000054_110 Hb_000054_110 Hb_001096_020--Hb_000054_110 Hb_009848_060 Hb_009848_060 Hb_009848_050--Hb_009848_060 Hb_010490_060 Hb_010490_060 Hb_009848_050--Hb_010490_060 Hb_185058_020 Hb_185058_020 Hb_009848_050--Hb_185058_020 Hb_000137_060 Hb_000137_060 Hb_009848_050--Hb_000137_060 Hb_001571_020 Hb_001571_020 Hb_009848_050--Hb_001571_020 Hb_012463_010 Hb_012463_010 Hb_049365_010--Hb_012463_010 Hb_069147_010 Hb_069147_010 Hb_049365_010--Hb_069147_010 Hb_000260_730 Hb_000260_730 Hb_049365_010--Hb_000260_730 Hb_131320_010 Hb_131320_010 Hb_049365_010--Hb_131320_010 Hb_034197_020 Hb_034197_020 Hb_049365_010--Hb_034197_020 Hb_007951_070 Hb_007951_070 Hb_008033_060--Hb_007951_070 Hb_000649_180 Hb_000649_180 Hb_008033_060--Hb_000649_180 Hb_007237_010 Hb_007237_010 Hb_008033_060--Hb_007237_010 Hb_000445_030 Hb_000445_030 Hb_008033_060--Hb_000445_030 Hb_000692_110 Hb_000692_110 Hb_008033_060--Hb_000692_110 Hb_012092_080 Hb_012092_080 Hb_097021_010--Hb_012092_080 Hb_041813_050 Hb_041813_050 Hb_097021_010--Hb_041813_050 Hb_062192_060 Hb_062192_060 Hb_097021_010--Hb_062192_060 Hb_097021_010--Hb_142570_010 Hb_097021_010--Hb_009848_050 Hb_002473_140 Hb_002473_140 Hb_142570_010--Hb_002473_140 Hb_159938_010 Hb_159938_010 Hb_142570_010--Hb_159938_010 Hb_142570_010--Hb_041813_050 Hb_001519_210 Hb_001519_210 Hb_142570_010--Hb_001519_210 Hb_088410_010 Hb_088410_010 Hb_142570_010--Hb_088410_010 Hb_043792_020 Hb_043792_020 Hb_142570_010--Hb_043792_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.142836 0.0529079 0.102403 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.20855 0.583261 0.689014

CAGE analysis