Hb_014361_010

Information

Type -
Description -
Location Contig14361: 6771-7662
Sequence    

Annotation

kegg
ID rcu:RCOM_1156000
description sigma factor sigb regulation protein rsbq, putative (EC:3.1.1.1)
nr
ID XP_012079584.1
description PREDICTED: probable esterase KAI2 [Jatropha curcas]
swissprot
ID Q10J20
description Probable esterase D14L OS=Oryza sativa subsp. japonica GN=D14L PE=2 SV=1
trembl
ID A0A067KAJ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12499 PE=4 SV=1
Gene Ontology
ID GO:0052689
description probable esterase kai2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11444: 7090-7673
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014361_010 0.0 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
2 Hb_002759_030 0.1056352652 - - PREDICTED: serine/threonine-protein kinase PBS1 [Jatropha curcas]
3 Hb_000864_050 0.1250226522 - - zinc finger protein, putative [Ricinus communis]
4 Hb_005305_040 0.1348763134 transcription factor TF Family: C3H transcription factor, putative [Ricinus communis]
5 Hb_004957_050 0.137121607 - - hypothetical protein POPTR_0010s12360g [Populus trichocarpa]
6 Hb_001195_710 0.1406402195 - - glycosyltransferase family GT8 protein [Populus deltoides]
7 Hb_001001_070 0.1422338541 - - PREDICTED: uncharacterized protein LOC105633663 [Jatropha curcas]
8 Hb_000457_120 0.1435348823 - - PREDICTED: death-associated protein kinase dapk-1 [Jatropha curcas]
9 Hb_002835_070 0.1458094758 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000005_010 0.1475500475 - - PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
11 Hb_001936_120 0.1487671248 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
12 Hb_006569_080 0.1510076791 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_024559 [Vitis vinifera]
13 Hb_182869_010 0.1523481202 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
14 Hb_002973_050 0.1530281653 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
15 Hb_005914_120 0.1554774958 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
16 Hb_000392_540 0.1561735633 - - PREDICTED: hypersensitive-induced response protein 1 [Sesamum indicum]
17 Hb_000928_200 0.1562452053 - - PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
18 Hb_163950_050 0.1576642243 - - protein binding protein, putative [Ricinus communis]
19 Hb_001079_050 0.1582324435 - - Calmodulin, putative [Ricinus communis]
20 Hb_133974_010 0.1594670962 - - PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_014361_010 Hb_014361_010 Hb_002759_030 Hb_002759_030 Hb_014361_010--Hb_002759_030 Hb_000864_050 Hb_000864_050 Hb_014361_010--Hb_000864_050 Hb_005305_040 Hb_005305_040 Hb_014361_010--Hb_005305_040 Hb_004957_050 Hb_004957_050 Hb_014361_010--Hb_004957_050 Hb_001195_710 Hb_001195_710 Hb_014361_010--Hb_001195_710 Hb_001001_070 Hb_001001_070 Hb_014361_010--Hb_001001_070 Hb_002759_030--Hb_005305_040 Hb_002759_030--Hb_001195_710 Hb_000457_120 Hb_000457_120 Hb_002759_030--Hb_000457_120 Hb_000928_200 Hb_000928_200 Hb_002759_030--Hb_000928_200 Hb_002759_030--Hb_001001_070 Hb_133492_010 Hb_133492_010 Hb_000864_050--Hb_133492_010 Hb_000599_160 Hb_000599_160 Hb_000864_050--Hb_000599_160 Hb_180980_010 Hb_180980_010 Hb_000864_050--Hb_180980_010 Hb_002171_050 Hb_002171_050 Hb_000864_050--Hb_002171_050 Hb_004625_020 Hb_004625_020 Hb_000864_050--Hb_004625_020 Hb_001936_120 Hb_001936_120 Hb_000864_050--Hb_001936_120 Hb_000161_140 Hb_000161_140 Hb_005305_040--Hb_000161_140 Hb_005305_040--Hb_001936_120 Hb_005305_040--Hb_000928_200 Hb_005305_040--Hb_000457_120 Hb_163950_050 Hb_163950_050 Hb_005305_040--Hb_163950_050 Hb_003052_080 Hb_003052_080 Hb_004957_050--Hb_003052_080 Hb_000392_540 Hb_000392_540 Hb_004957_050--Hb_000392_540 Hb_002374_510 Hb_002374_510 Hb_004957_050--Hb_002374_510 Hb_113766_010 Hb_113766_010 Hb_004957_050--Hb_113766_010 Hb_001008_080 Hb_001008_080 Hb_004957_050--Hb_001008_080 Hb_001096_010 Hb_001096_010 Hb_001195_710--Hb_001096_010 Hb_000368_050 Hb_000368_050 Hb_001195_710--Hb_000368_050 Hb_001511_220 Hb_001511_220 Hb_001195_710--Hb_001511_220 Hb_001195_710--Hb_002171_050 Hb_182869_010 Hb_182869_010 Hb_001195_710--Hb_182869_010 Hb_000449_070 Hb_000449_070 Hb_001195_710--Hb_000449_070 Hb_000251_120 Hb_000251_120 Hb_001001_070--Hb_000251_120 Hb_008461_060 Hb_008461_060 Hb_001001_070--Hb_008461_060 Hb_000108_180 Hb_000108_180 Hb_001001_070--Hb_000108_180 Hb_003177_040 Hb_003177_040 Hb_001001_070--Hb_003177_040 Hb_002081_020 Hb_002081_020 Hb_001001_070--Hb_002081_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.387519 0.426978 2.90485 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0663853 0.156598 0 0.190074 1.67861

CAGE analysis