Hb_014361_040

Information

Type -
Description -
Location Contig14361: 26781-29060
Sequence    

Annotation

kegg
ID rcu:RCOM_0396690
description Xylem serine proteinase 1 precursor, putative (EC:3.4.21.25)
nr
ID XP_012079361.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067K7E2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12503 PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014361_040 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_000162_070 0.0962444567 - - phospholipase C, putative [Ricinus communis]
3 Hb_026144_040 0.1035720656 - - -
4 Hb_007237_080 0.1055442707 - - amino acid transporter, putative [Ricinus communis]
5 Hb_002097_080 0.1117665575 - - phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]
6 Hb_000045_080 0.11289238 - - amino acid transporter, putative [Ricinus communis]
7 Hb_001728_130 0.1147946915 - - alcohol dehydrogenase, putative [Ricinus communis]
8 Hb_000325_010 0.1217767986 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
9 Hb_001117_180 0.1223459446 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
10 Hb_152980_020 0.1226088362 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
11 Hb_000181_260 0.1229756604 - - PREDICTED: uncharacterized protein LOC105139156 [Populus euphratica]
12 Hb_154038_040 0.1256932435 - - nutrient reservoir, putative [Ricinus communis]
13 Hb_002811_110 0.1275295016 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
14 Hb_005545_110 0.127657942 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
15 Hb_001269_400 0.1281336887 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
16 Hb_002374_520 0.1293888075 - - early nodulin 8 precursor family protein [Populus trichocarpa]
17 Hb_000384_020 0.1325931439 - - sucrose phosphate syntase, putative [Ricinus communis]
18 Hb_002598_020 0.1326762408 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
19 Hb_008598_010 0.1330240317 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
20 Hb_002370_050 0.1347608896 - - hypothetical protein JCGZ_18849 [Jatropha curcas]

Gene co-expression network

sample Hb_014361_040 Hb_014361_040 Hb_000162_070 Hb_000162_070 Hb_014361_040--Hb_000162_070 Hb_026144_040 Hb_026144_040 Hb_014361_040--Hb_026144_040 Hb_007237_080 Hb_007237_080 Hb_014361_040--Hb_007237_080 Hb_002097_080 Hb_002097_080 Hb_014361_040--Hb_002097_080 Hb_000045_080 Hb_000045_080 Hb_014361_040--Hb_000045_080 Hb_001728_130 Hb_001728_130 Hb_014361_040--Hb_001728_130 Hb_000162_070--Hb_026144_040 Hb_008598_010 Hb_008598_010 Hb_000162_070--Hb_008598_010 Hb_000162_070--Hb_007237_080 Hb_000162_070--Hb_000045_080 Hb_000991_080 Hb_000991_080 Hb_000162_070--Hb_000991_080 Hb_002811_110 Hb_002811_110 Hb_000162_070--Hb_002811_110 Hb_026144_040--Hb_007237_080 Hb_026144_040--Hb_008598_010 Hb_026144_040--Hb_000045_080 Hb_002598_020 Hb_002598_020 Hb_026144_040--Hb_002598_020 Hb_002151_020 Hb_002151_020 Hb_026144_040--Hb_002151_020 Hb_002370_050 Hb_002370_050 Hb_007237_080--Hb_002370_050 Hb_001269_400 Hb_001269_400 Hb_007237_080--Hb_001269_400 Hb_007237_080--Hb_002811_110 Hb_000571_060 Hb_000571_060 Hb_007237_080--Hb_000571_060 Hb_002685_220 Hb_002685_220 Hb_002097_080--Hb_002685_220 Hb_001976_020 Hb_001976_020 Hb_002097_080--Hb_001976_020 Hb_098795_030 Hb_098795_030 Hb_002097_080--Hb_098795_030 Hb_002685_160 Hb_002685_160 Hb_002097_080--Hb_002685_160 Hb_000028_580 Hb_000028_580 Hb_002097_080--Hb_000028_580 Hb_000045_080--Hb_008598_010 Hb_017862_030 Hb_017862_030 Hb_000045_080--Hb_017862_030 Hb_000045_080--Hb_002151_020 Hb_000384_020 Hb_000384_020 Hb_000045_080--Hb_000384_020 Hb_000095_070 Hb_000095_070 Hb_001728_130--Hb_000095_070 Hb_135720_010 Hb_135720_010 Hb_001728_130--Hb_135720_010 Hb_005545_110 Hb_005545_110 Hb_001728_130--Hb_005545_110 Hb_164117_010 Hb_164117_010 Hb_001728_130--Hb_164117_010 Hb_073808_010 Hb_073808_010 Hb_001728_130--Hb_073808_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.21819 45.1897 23.4204 115.09 0.656318 0.735674
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.136742 0.0461132 0 33.7846 53.3352

CAGE analysis