Hb_014361_070

Information

Type -
Description -
Location Contig14361: 47731-58152
Sequence    

Annotation

kegg
ID rcu:RCOM_0396450
description hypothetical protein
nr
ID XP_012079366.1
description PREDICTED: molybdate-anion transporter [Jatropha curcas]
swissprot
ID Q921Y4
description Molybdate-anion transporter OS=Mus musculus GN=Mfsd5 PE=2 SV=1
trembl
ID A0A067K726
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12507 PE=4 SV=1
Gene Ontology
ID GO:0016021
description molybdate-anion transporter

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11452: 47684-47804 , PASA_asmbl_11454: 52781-53779 , PASA_asmbl_11456: 53796-55699 , PASA_asmbl_11457: 55900-57847
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014361_070 0.0 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
2 Hb_000975_040 0.0479260154 - - hypothetical protein CICLE_v10028249mg [Citrus clementina]
3 Hb_003371_110 0.0479991425 - - PREDICTED: protein EMSY-LIKE 3 [Jatropha curcas]
4 Hb_007576_110 0.050964248 - - Endoplasmic reticulum vesicle transporter protein [Theobroma cacao]
5 Hb_000289_040 0.0521895092 - - Poly(A) polymerase alpha, putative [Ricinus communis]
6 Hb_002823_030 0.0551983011 - - -
7 Hb_001195_320 0.0554131713 - - PREDICTED: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Jatropha curcas]
8 Hb_002835_230 0.0566170674 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
9 Hb_003680_150 0.0614298268 - - srpk, putative [Ricinus communis]
10 Hb_000029_300 0.0618287664 - - hypothetical protein JCGZ_10048 [Jatropha curcas]
11 Hb_000484_030 0.0621187119 - - PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Jatropha curcas]
12 Hb_004195_200 0.0621834776 - - glycosyl transferase family 1 family protein [Populus trichocarpa]
13 Hb_001104_160 0.063258359 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
14 Hb_007943_110 0.063496611 - - PREDICTED: basic salivary proline-rich protein 3 [Jatropha curcas]
15 Hb_002078_110 0.0637789068 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
16 Hb_000190_120 0.0651541155 - - PREDICTED: uncharacterized protein LOC105649936 [Jatropha curcas]
17 Hb_000617_100 0.0651851509 - - PREDICTED: uncharacterized protein LOC105647493 [Jatropha curcas]
18 Hb_000227_220 0.0657123701 - - PREDICTED: protein phosphatase 2C 70 [Jatropha curcas]
19 Hb_012395_140 0.0657865703 - - PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
20 Hb_001195_560 0.0671200027 - - PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_014361_070 Hb_014361_070 Hb_000975_040 Hb_000975_040 Hb_014361_070--Hb_000975_040 Hb_003371_110 Hb_003371_110 Hb_014361_070--Hb_003371_110 Hb_007576_110 Hb_007576_110 Hb_014361_070--Hb_007576_110 Hb_000289_040 Hb_000289_040 Hb_014361_070--Hb_000289_040 Hb_002823_030 Hb_002823_030 Hb_014361_070--Hb_002823_030 Hb_001195_320 Hb_001195_320 Hb_014361_070--Hb_001195_320 Hb_000958_140 Hb_000958_140 Hb_000975_040--Hb_000958_140 Hb_001369_130 Hb_001369_130 Hb_000975_040--Hb_001369_130 Hb_000696_230 Hb_000696_230 Hb_000975_040--Hb_000696_230 Hb_012395_140 Hb_012395_140 Hb_000975_040--Hb_012395_140 Hb_002835_230 Hb_002835_230 Hb_000975_040--Hb_002835_230 Hb_003371_110--Hb_001195_320 Hb_000166_130 Hb_000166_130 Hb_003371_110--Hb_000166_130 Hb_003371_110--Hb_002823_030 Hb_000190_120 Hb_000190_120 Hb_003371_110--Hb_000190_120 Hb_004935_030 Hb_004935_030 Hb_003371_110--Hb_004935_030 Hb_000789_310 Hb_000789_310 Hb_007576_110--Hb_000789_310 Hb_000366_120 Hb_000366_120 Hb_007576_110--Hb_000366_120 Hb_007576_110--Hb_000190_120 Hb_001409_020 Hb_001409_020 Hb_007576_110--Hb_001409_020 Hb_002375_010 Hb_002375_010 Hb_007576_110--Hb_002375_010 Hb_002876_130 Hb_002876_130 Hb_000289_040--Hb_002876_130 Hb_140049_040 Hb_140049_040 Hb_000289_040--Hb_140049_040 Hb_000679_310 Hb_000679_310 Hb_000289_040--Hb_000679_310 Hb_001104_160 Hb_001104_160 Hb_000289_040--Hb_001104_160 Hb_000614_210 Hb_000614_210 Hb_000289_040--Hb_000614_210 Hb_003680_150 Hb_003680_150 Hb_002823_030--Hb_003680_150 Hb_002823_030--Hb_000190_120 Hb_002823_030--Hb_002835_230 Hb_003018_130 Hb_003018_130 Hb_002823_030--Hb_003018_130 Hb_001195_320--Hb_000166_130 Hb_002329_040 Hb_002329_040 Hb_001195_320--Hb_002329_040 Hb_003029_110 Hb_003029_110 Hb_001195_320--Hb_003029_110 Hb_000183_020 Hb_000183_020 Hb_001195_320--Hb_000183_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.12133 9.01275 6.60418 8.24588 10.2251 10.3764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.18255 6.53331 6.03808 7.10218 7.02691

CAGE analysis