Hb_014361_150

Information

Type -
Description -
Location Contig14361: 125500-127510
Sequence    

Annotation

kegg
ID rcu:RCOM_0578400
description hypothetical protein
nr
ID XP_012079378.1
description PREDICTED: uncharacterized protein LOC105639827 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9SGY4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0578400 PE=4 SV=1
Gene Ontology
ID GO:0070461
description PREDICTED: uncharacterized protein LOC105639827

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11468: 126952-127403
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014361_150 0.0 - - PREDICTED: uncharacterized protein LOC105639827 [Jatropha curcas]
2 Hb_000260_440 0.0767780154 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Jatropha curcas]
3 Hb_002379_050 0.0788927422 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
4 Hb_004357_020 0.0811297472 - - PREDICTED: uncharacterized protein LOC105637355 [Jatropha curcas]
5 Hb_000760_020 0.0820093111 - - PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform X1 [Jatropha curcas]
6 Hb_000125_200 0.0820170154 transcription factor TF Family: bZIP PREDICTED: probable transcription factor PosF21 [Jatropha curcas]
7 Hb_005306_160 0.0825031345 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
8 Hb_000291_060 0.088561058 transcription factor TF Family: C2H2 PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]
9 Hb_001247_130 0.0897580889 - - PREDICTED: shaggy-related protein kinase alpha [Jatropha curcas]
10 Hb_000718_070 0.0903801742 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010362_030 0.0909728889 - - PREDICTED: QWRF motif-containing protein 2 [Jatropha curcas]
12 Hb_032264_060 0.0916811859 - - hypothetical protein JCGZ_02506 [Jatropha curcas]
13 Hb_000139_190 0.0922668906 transcription factor TF Family: TRAF PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2 isoform X2 [Jatropha curcas]
14 Hb_001077_030 0.0923788344 - - PREDICTED: somatic embryogenesis receptor kinase 1 isoform X2 [Jatropha curcas]
15 Hb_001751_140 0.0929911146 - - PREDICTED: uncharacterized protein LOC105648510 isoform X1 [Jatropha curcas]
16 Hb_001635_040 0.0942626579 - - PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Gossypium raimondii]
17 Hb_143766_110 0.0947899494 - - PREDICTED: asparagine--tRNA ligase, cytoplasmic 1 [Jatropha curcas]
18 Hb_000567_190 0.0949636135 - - PREDICTED: protein SCAR3 isoform X2 [Jatropha curcas]
19 Hb_000042_340 0.0951422984 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
20 Hb_002078_110 0.0953902025 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]

Gene co-expression network

sample Hb_014361_150 Hb_014361_150 Hb_000260_440 Hb_000260_440 Hb_014361_150--Hb_000260_440 Hb_002379_050 Hb_002379_050 Hb_014361_150--Hb_002379_050 Hb_004357_020 Hb_004357_020 Hb_014361_150--Hb_004357_020 Hb_000760_020 Hb_000760_020 Hb_014361_150--Hb_000760_020 Hb_000125_200 Hb_000125_200 Hb_014361_150--Hb_000125_200 Hb_005306_160 Hb_005306_160 Hb_014361_150--Hb_005306_160 Hb_143766_110 Hb_143766_110 Hb_000260_440--Hb_143766_110 Hb_000777_050 Hb_000777_050 Hb_000260_440--Hb_000777_050 Hb_000291_060 Hb_000291_060 Hb_000260_440--Hb_000291_060 Hb_007765_080 Hb_007765_080 Hb_000260_440--Hb_007765_080 Hb_001635_040 Hb_001635_040 Hb_000260_440--Hb_001635_040 Hb_006615_120 Hb_006615_120 Hb_002379_050--Hb_006615_120 Hb_000116_060 Hb_000116_060 Hb_002379_050--Hb_000116_060 Hb_000718_070 Hb_000718_070 Hb_002379_050--Hb_000718_070 Hb_000230_430 Hb_000230_430 Hb_002379_050--Hb_000230_430 Hb_000162_280 Hb_000162_280 Hb_002379_050--Hb_000162_280 Hb_001728_050 Hb_001728_050 Hb_004357_020--Hb_001728_050 Hb_000162_030 Hb_000162_030 Hb_004357_020--Hb_000162_030 Hb_003633_070 Hb_003633_070 Hb_004357_020--Hb_003633_070 Hb_001247_130 Hb_001247_130 Hb_004357_020--Hb_001247_130 Hb_000070_080 Hb_000070_080 Hb_004357_020--Hb_000070_080 Hb_004357_020--Hb_000162_280 Hb_001077_030 Hb_001077_030 Hb_000760_020--Hb_001077_030 Hb_000525_100 Hb_000525_100 Hb_000760_020--Hb_000525_100 Hb_144166_010 Hb_144166_010 Hb_000760_020--Hb_144166_010 Hb_000760_020--Hb_000291_060 Hb_003096_060 Hb_003096_060 Hb_000760_020--Hb_003096_060 Hb_000983_120 Hb_000983_120 Hb_000125_200--Hb_000983_120 Hb_000125_200--Hb_000260_440 Hb_000042_340 Hb_000042_340 Hb_000125_200--Hb_000042_340 Hb_001377_320 Hb_001377_320 Hb_000125_200--Hb_001377_320 Hb_000125_200--Hb_000291_060 Hb_000076_160 Hb_000076_160 Hb_005306_160--Hb_000076_160 Hb_002046_110 Hb_002046_110 Hb_005306_160--Hb_002046_110 Hb_000928_220 Hb_000928_220 Hb_005306_160--Hb_000928_220 Hb_000576_020 Hb_000576_020 Hb_005306_160--Hb_000576_020 Hb_005306_160--Hb_000070_080 Hb_000309_040 Hb_000309_040 Hb_005306_160--Hb_000309_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.73985 11.4467 11.3826 7.35581 8.81858 9.10949
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.12562 4.79253 6.54964 3.41695 3.5352

CAGE analysis