Hb_014387_040

Information

Type -
Description -
Location Contig14387: 48444-48755
Sequence    

Annotation

kegg
ID rcu:RCOM_1557950
description hypothetical protein
nr
ID XP_012075751.1
description PREDICTED: uncharacterized protein LOC105636953 [Jatropha curcas]
swissprot
ID Q9SGU2
description Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1
trembl
ID A0A067KFK2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09195 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11567: 48412-48788
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014387_040 0.0 - - PREDICTED: uncharacterized protein LOC105636953 [Jatropha curcas]
2 Hb_129204_050 0.1502529666 transcription factor TF Family: MYB-related PREDICTED: myb-related protein 330-like [Prunus mume]
3 Hb_000140_240 0.1509156833 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s08640g [Populus trichocarpa]
4 Hb_000560_050 0.1566253317 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
5 Hb_038135_010 0.1568686801 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
6 Hb_019708_010 0.157155999 - - -
7 Hb_003121_020 0.1592705056 - - secretory peroxidase PX3 [Manihot esculenta]
8 Hb_119748_010 0.1596761072 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
9 Hb_014749_010 0.1622761914 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
10 Hb_001571_010 0.1627242302 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
11 Hb_000038_090 0.1630658897 transcription factor TF Family: NAC hypothetical protein POPTR_0002s05820g [Populus trichocarpa]
12 Hb_099198_010 0.1642375576 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
13 Hb_006533_010 0.164318752 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
14 Hb_007320_050 0.1643953882 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
15 Hb_000069_050 0.1654848984 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
16 Hb_004162_310 0.1664052073 - - tonoplast intrinsic protein, putative [Ricinus communis]
17 Hb_084495_010 0.166698293 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
18 Hb_008775_050 0.1684433343 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
19 Hb_005066_060 0.1705976841 - - FAD-binding Berberine family protein, putative [Theobroma cacao]
20 Hb_012136_010 0.1708013905 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]

Gene co-expression network

sample Hb_014387_040 Hb_014387_040 Hb_129204_050 Hb_129204_050 Hb_014387_040--Hb_129204_050 Hb_000140_240 Hb_000140_240 Hb_014387_040--Hb_000140_240 Hb_000560_050 Hb_000560_050 Hb_014387_040--Hb_000560_050 Hb_038135_010 Hb_038135_010 Hb_014387_040--Hb_038135_010 Hb_019708_010 Hb_019708_010 Hb_014387_040--Hb_019708_010 Hb_003121_020 Hb_003121_020 Hb_014387_040--Hb_003121_020 Hb_001775_050 Hb_001775_050 Hb_129204_050--Hb_001775_050 Hb_000705_100 Hb_000705_100 Hb_129204_050--Hb_000705_100 Hb_000705_060 Hb_000705_060 Hb_129204_050--Hb_000705_060 Hb_001101_020 Hb_001101_020 Hb_129204_050--Hb_001101_020 Hb_001369_320 Hb_001369_320 Hb_129204_050--Hb_001369_320 Hb_000057_160 Hb_000057_160 Hb_129204_050--Hb_000057_160 Hb_004217_010 Hb_004217_010 Hb_000140_240--Hb_004217_010 Hb_001571_010 Hb_001571_010 Hb_000140_240--Hb_001571_010 Hb_000069_050 Hb_000069_050 Hb_000140_240--Hb_000069_050 Hb_000038_090 Hb_000038_090 Hb_000140_240--Hb_000038_090 Hb_000140_240--Hb_003121_020 Hb_000560_050--Hb_038135_010 Hb_000560_050--Hb_019708_010 Hb_119748_010 Hb_119748_010 Hb_000560_050--Hb_119748_010 Hb_014749_010 Hb_014749_010 Hb_000560_050--Hb_014749_010 Hb_007320_050 Hb_007320_050 Hb_000560_050--Hb_007320_050 Hb_006533_010 Hb_006533_010 Hb_000560_050--Hb_006533_010 Hb_038135_010--Hb_019708_010 Hb_038135_010--Hb_119748_010 Hb_038135_010--Hb_006533_010 Hb_038135_010--Hb_014749_010 Hb_005066_060 Hb_005066_060 Hb_038135_010--Hb_005066_060 Hb_019708_010--Hb_119748_010 Hb_019708_010--Hb_006533_010 Hb_019708_010--Hb_005066_060 Hb_012136_010 Hb_012136_010 Hb_019708_010--Hb_012136_010 Hb_084495_010 Hb_084495_010 Hb_003121_020--Hb_084495_010 Hb_099198_010 Hb_099198_010 Hb_003121_020--Hb_099198_010 Hb_014113_010 Hb_014113_010 Hb_003121_020--Hb_014113_010 Hb_010839_070 Hb_010839_070 Hb_003121_020--Hb_010839_070 Hb_003121_020--Hb_001571_010 Hb_000640_270 Hb_000640_270 Hb_003121_020--Hb_000640_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.614392 2.52611 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 9.61013 0

CAGE analysis