Hb_014497_050

Information

Type transcription factor
Description TF Family: bZIP
Location Contig14497: 41130-43647
Sequence    

Annotation

kegg
ID rcu:RCOM_1602280
description hypothetical protein
nr
ID KDP36730.1
description hypothetical protein JCGZ_08021 [Jatropha curcas]
swissprot
ID Q9C7S0
description bZIP transcription factor 60 OS=Arabidopsis thaliana GN=BZIP60 PE=1 SV=1
trembl
ID A0A067KWW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08021 PE=4 SV=1
Gene Ontology
ID GO:0003700
description bzip transcription factor 60

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11697: 41199-43674
cDNA
(Sanger)
(ID:Location)		 035_I01.ab1: 41225-42510 , 041_I19.ab1: 41226-42562 , 050_I09.ab1: 41226-42562

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014497_050 0.0 transcription factor TF Family: bZIP hypothetical protein JCGZ_08021 [Jatropha curcas]
2 Hb_021409_040 0.0578916517 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
3 Hb_000366_120 0.0596787645 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
4 Hb_011671_430 0.0605078983 - - PREDICTED: uncharacterized protein LOC105648668 [Jatropha curcas]
5 Hb_000915_020 0.0647244851 - - unnamed protein product [Vitis vinifera]
6 Hb_028285_010 0.0691706937 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Jatropha curcas]
7 Hb_000030_190 0.0714631578 - - PREDICTED: TATA-box-binding protein-like isoform X1 [Citrus sinensis]
8 Hb_008511_090 0.0744014847 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
9 Hb_001409_020 0.0753307646 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
10 Hb_007576_110 0.0767302498 - - Endoplasmic reticulum vesicle transporter protein [Theobroma cacao]
11 Hb_003549_150 0.0775869148 - - clathrin coat adaptor ap3 medium chain, putative [Ricinus communis]
12 Hb_000789_310 0.0777552857 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
13 Hb_003761_010 0.0778325584 - - alcohol dehydrogenase, putative [Ricinus communis]
14 Hb_000630_050 0.0786158131 - - conserved hypothetical protein [Ricinus communis]
15 Hb_008246_040 0.0796294744 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2a-like [Jatropha curcas]
16 Hb_001408_040 0.0797627407 - - PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Jatropha curcas]
17 Hb_003058_190 0.0798668554 - - PREDICTED: uncharacterized protein LOC105628951 isoform X1 [Jatropha curcas]
18 Hb_004355_020 0.0823446126 - - PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Jatropha curcas]
19 Hb_000521_320 0.0823566616 - - hypothetical protein POPTR_0001s23520g [Populus trichocarpa]
20 Hb_001635_090 0.082358139 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_014497_050 Hb_014497_050 Hb_021409_040 Hb_021409_040 Hb_014497_050--Hb_021409_040 Hb_000366_120 Hb_000366_120 Hb_014497_050--Hb_000366_120 Hb_011671_430 Hb_011671_430 Hb_014497_050--Hb_011671_430 Hb_000915_020 Hb_000915_020 Hb_014497_050--Hb_000915_020 Hb_028285_010 Hb_028285_010 Hb_014497_050--Hb_028285_010 Hb_000030_190 Hb_000030_190 Hb_014497_050--Hb_000030_190 Hb_021409_040--Hb_000366_120 Hb_001409_020 Hb_001409_020 Hb_021409_040--Hb_001409_020 Hb_006634_070 Hb_006634_070 Hb_021409_040--Hb_006634_070 Hb_000958_140 Hb_000958_140 Hb_021409_040--Hb_000958_140 Hb_022115_020 Hb_022115_020 Hb_021409_040--Hb_022115_020 Hb_007576_110 Hb_007576_110 Hb_000366_120--Hb_007576_110 Hb_004195_200 Hb_004195_200 Hb_000366_120--Hb_004195_200 Hb_000366_120--Hb_001409_020 Hb_000789_310 Hb_000789_310 Hb_000366_120--Hb_000789_310 Hb_000038_170 Hb_000038_170 Hb_011671_430--Hb_000038_170 Hb_004577_020 Hb_004577_020 Hb_011671_430--Hb_004577_020 Hb_003058_190 Hb_003058_190 Hb_011671_430--Hb_003058_190 Hb_004355_020 Hb_004355_020 Hb_011671_430--Hb_004355_020 Hb_003158_010 Hb_003158_010 Hb_011671_430--Hb_003158_010 Hb_008246_040 Hb_008246_040 Hb_000915_020--Hb_008246_040 Hb_000915_020--Hb_001409_020 Hb_000915_020--Hb_011671_430 Hb_000308_030 Hb_000308_030 Hb_000915_020--Hb_000308_030 Hb_005993_050 Hb_005993_050 Hb_000915_020--Hb_005993_050 Hb_000062_070 Hb_000062_070 Hb_028285_010--Hb_000062_070 Hb_005048_130 Hb_005048_130 Hb_028285_010--Hb_005048_130 Hb_000907_110 Hb_000907_110 Hb_028285_010--Hb_000907_110 Hb_003761_010 Hb_003761_010 Hb_028285_010--Hb_003761_010 Hb_001408_040 Hb_001408_040 Hb_028285_010--Hb_001408_040 Hb_000030_190--Hb_000789_310 Hb_005291_030 Hb_005291_030 Hb_000030_190--Hb_005291_030 Hb_000345_380 Hb_000345_380 Hb_000030_190--Hb_000345_380 Hb_000030_190--Hb_001409_020 Hb_000030_190--Hb_007576_110 Hb_000173_490 Hb_000173_490 Hb_000030_190--Hb_000173_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
130.844 124.938 84.2929 110.614 126.892 121.839
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
151.764 94.4546 120.873 107.2 53.7771

CAGE analysis