Hb_014508_010

Information

Type -
Description -
Location Contig14508: 196-1001
Sequence    

Annotation

kegg
ID vvi:100258776
description hypothetical protein
nr
ID XP_012067055.1
description PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0S3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01854 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014508_010 0.0 - - PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
2 Hb_000740_150 0.1396661132 - - PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
3 Hb_029977_020 0.1480334658 - - PREDICTED: uncharacterized protein LOC105640153 isoform X1 [Jatropha curcas]
4 Hb_004052_100 0.1615309749 - - PREDICTED: protein SPIRAL1-like 3 [Jatropha curcas]
5 Hb_001408_170 0.1622488965 - - PREDICTED: phosphoglycolate phosphatase 2 [Jatropha curcas]
6 Hb_133799_010 0.1666977382 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001250_130 0.1718877927 - - hypothetical protein POPTR_0008s19280g [Populus trichocarpa]
8 Hb_000206_230 0.1756730152 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001329_070 0.1796572477 - - Glycogen synthase kinase-3 beta, putative [Ricinus communis]
10 Hb_011242_050 0.1883627806 - - PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa [Jatropha curcas]
11 Hb_032568_010 0.1900151452 - - PREDICTED: protein phosphatase 2C 56-like [Jatropha curcas]
12 Hb_005332_040 0.1902795309 - - hypothetical protein RCOM_0530890 [Ricinus communis]
13 Hb_052764_070 0.1904771475 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
14 Hb_106552_070 0.1914005874 - - conserved hypothetical protein [Ricinus communis]
15 Hb_089140_090 0.2003388834 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X3 [Beta vulgaris subsp. vulgaris]
16 Hb_002027_440 0.2007003038 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004109_210 0.2018201244 - - PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like [Jatropha curcas]
18 Hb_004116_070 0.2064639641 - - PREDICTED: uncharacterized protein LOC105646325 [Jatropha curcas]
19 Hb_006711_090 0.2079514283 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
20 Hb_003633_100 0.2088081294 - - hypoia-responsive family protein 1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_014508_010 Hb_014508_010 Hb_000740_150 Hb_000740_150 Hb_014508_010--Hb_000740_150 Hb_029977_020 Hb_029977_020 Hb_014508_010--Hb_029977_020 Hb_004052_100 Hb_004052_100 Hb_014508_010--Hb_004052_100 Hb_001408_170 Hb_001408_170 Hb_014508_010--Hb_001408_170 Hb_133799_010 Hb_133799_010 Hb_014508_010--Hb_133799_010 Hb_001250_130 Hb_001250_130 Hb_014508_010--Hb_001250_130 Hb_017439_010 Hb_017439_010 Hb_000740_150--Hb_017439_010 Hb_001268_160 Hb_001268_160 Hb_000740_150--Hb_001268_160 Hb_003055_090 Hb_003055_090 Hb_000740_150--Hb_003055_090 Hb_000740_150--Hb_001408_170 Hb_000740_150--Hb_029977_020 Hb_005332_040 Hb_005332_040 Hb_029977_020--Hb_005332_040 Hb_000206_230 Hb_000206_230 Hb_029977_020--Hb_000206_230 Hb_010672_050 Hb_010672_050 Hb_029977_020--Hb_010672_050 Hb_029977_020--Hb_004052_100 Hb_003299_020 Hb_003299_020 Hb_029977_020--Hb_003299_020 Hb_004052_100--Hb_001408_170 Hb_011174_040 Hb_011174_040 Hb_004052_100--Hb_011174_040 Hb_001329_070 Hb_001329_070 Hb_004052_100--Hb_001329_070 Hb_004052_100--Hb_003299_020 Hb_003398_040 Hb_003398_040 Hb_004052_100--Hb_003398_040 Hb_001377_530 Hb_001377_530 Hb_004052_100--Hb_001377_530 Hb_001408_170--Hb_001268_160 Hb_001401_040 Hb_001401_040 Hb_001408_170--Hb_001401_040 Hb_001408_170--Hb_001377_530 Hb_010381_040 Hb_010381_040 Hb_001408_170--Hb_010381_040 Hb_001408_170--Hb_011174_040 Hb_052764_070 Hb_052764_070 Hb_133799_010--Hb_052764_070 Hb_001767_060 Hb_001767_060 Hb_133799_010--Hb_001767_060 Hb_154038_020 Hb_154038_020 Hb_133799_010--Hb_154038_020 Hb_001307_110 Hb_001307_110 Hb_133799_010--Hb_001307_110 Hb_033152_120 Hb_033152_120 Hb_133799_010--Hb_033152_120 Hb_001250_130--Hb_001408_170 Hb_000622_170 Hb_000622_170 Hb_001250_130--Hb_000622_170 Hb_001250_130--Hb_017439_010 Hb_000417_090 Hb_000417_090 Hb_001250_130--Hb_000417_090 Hb_000328_010 Hb_000328_010 Hb_001250_130--Hb_000328_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.610679 2.34425 2.55156 0.0546257 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.271999 1.17525 0.3614 0.444493 0.797506

CAGE analysis