Hb_014549_010

Information

Type -
Description -
Location Contig14549: 6270-7910
Sequence    

Annotation

kegg
ID cam:101495949
description uncharacterized LOC101495949
nr
ID XP_004516427.1
description PREDICTED: uncharacterized protein LOC101512634 [Cicer arietinum]
swissprot
ID -
description -
trembl
ID K4BZM3
description Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g023850.1 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11817: 6937-8150
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014549_010 0.0 - - PREDICTED: uncharacterized protein LOC101512634 [Cicer arietinum]
2 Hb_036602_010 0.0452393293 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
3 Hb_004154_010 0.078394515 - - Rop guanine nucleotide exchange factor, putative [Ricinus communis]
4 Hb_003489_010 0.1080201313 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
5 Hb_005701_100 0.1179313604 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
6 Hb_185830_090 0.1180921366 - - conserved hypothetical protein [Ricinus communis]
7 Hb_006721_060 0.1187259359 - - RnaseH (mitochondrion) [Malus domestica]
8 Hb_005599_010 0.1190890134 - - Protein MLO, putative [Ricinus communis]
9 Hb_000635_190 0.1218933744 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
10 Hb_005217_070 0.1299492896 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000483_120 0.1311115217 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
12 Hb_096878_010 0.1326074737 - - hypothetical protein POPTR_0112s002001g, partial [Populus trichocarpa]
13 Hb_006197_010 0.1345220528 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
14 Hb_011826_010 0.1452732077 - - Disease resistance protein RPM1, putative [Ricinus communis]
15 Hb_003050_170 0.1465616151 - - conserved hypothetical protein [Ricinus communis]
16 Hb_177195_010 0.1507694977 - - Leucine-rich repeat protein kinase family protein isoform 3, partial [Theobroma cacao]
17 Hb_057721_010 0.1554410043 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
18 Hb_180695_010 0.1565895533 - - hypothetical protein CICLE_v10013449mg [Citrus clementina]
19 Hb_000289_020 0.1568269909 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
20 Hb_119583_030 0.1584398377 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_014549_010 Hb_014549_010 Hb_036602_010 Hb_036602_010 Hb_014549_010--Hb_036602_010 Hb_004154_010 Hb_004154_010 Hb_014549_010--Hb_004154_010 Hb_003489_010 Hb_003489_010 Hb_014549_010--Hb_003489_010 Hb_005701_100 Hb_005701_100 Hb_014549_010--Hb_005701_100 Hb_185830_090 Hb_185830_090 Hb_014549_010--Hb_185830_090 Hb_006721_060 Hb_006721_060 Hb_014549_010--Hb_006721_060 Hb_036602_010--Hb_003489_010 Hb_000483_120 Hb_000483_120 Hb_036602_010--Hb_000483_120 Hb_036602_010--Hb_005701_100 Hb_036602_010--Hb_004154_010 Hb_006197_010 Hb_006197_010 Hb_036602_010--Hb_006197_010 Hb_005599_010 Hb_005599_010 Hb_004154_010--Hb_005599_010 Hb_004154_010--Hb_185830_090 Hb_003226_060 Hb_003226_060 Hb_004154_010--Hb_003226_060 Hb_003050_170 Hb_003050_170 Hb_004154_010--Hb_003050_170 Hb_003489_010--Hb_000483_120 Hb_000270_050 Hb_000270_050 Hb_003489_010--Hb_000270_050 Hb_000289_020 Hb_000289_020 Hb_003489_010--Hb_000289_020 Hb_177179_020 Hb_177179_020 Hb_003489_010--Hb_177179_020 Hb_008215_020 Hb_008215_020 Hb_005701_100--Hb_008215_020 Hb_012092_040 Hb_012092_040 Hb_005701_100--Hb_012092_040 Hb_025163_020 Hb_025163_020 Hb_005701_100--Hb_025163_020 Hb_177195_010 Hb_177195_010 Hb_005701_100--Hb_177195_010 Hb_096878_010 Hb_096878_010 Hb_185830_090--Hb_096878_010 Hb_185830_090--Hb_003050_170 Hb_000635_190 Hb_000635_190 Hb_185830_090--Hb_000635_190 Hb_133508_020 Hb_133508_020 Hb_185830_090--Hb_133508_020 Hb_185830_090--Hb_006721_060 Hb_006721_060--Hb_000635_190 Hb_006721_060--Hb_096878_010 Hb_004096_140 Hb_004096_140 Hb_006721_060--Hb_004096_140 Hb_006721_060--Hb_003050_170 Hb_000172_310 Hb_000172_310 Hb_006721_060--Hb_000172_310 Hb_000060_080 Hb_000060_080 Hb_006721_060--Hb_000060_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.104087 0.341144 0.399901 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0419419 0

CAGE analysis