Hb_014568_020

Information

Type -
Description -
Location Contig14568: 6720-7390
Sequence    

Annotation

kegg
ID rcu:RCOM_0628780
description hypothetical protein
nr
ID XP_012072270.1
description PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
swissprot
ID Q290J8
description GPI mannosyltransferase 2 OS=Drosophila pseudoobscura pseudoobscura GN=GA19757 PE=3 SV=1
trembl
ID A0A067L0S4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04733 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014568_020 0.0 - - PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
2 Hb_000608_460 0.1427299457 - - -
3 Hb_000915_030 0.1487950042 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
4 Hb_181240_010 0.2254453888 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
5 Hb_002888_010 0.2558356327 - - -
6 Hb_000363_150 0.2645795572 - - hypothetical protein POPTR_0011s09040g [Populus trichocarpa]
7 Hb_004324_080 0.266033813 - - -
8 Hb_004734_050 0.2888725414 - - -
9 Hb_004448_060 0.2984031166 - - conserved hypothetical protein [Ricinus communis]
10 Hb_119504_010 0.3077746915 - - hypothetical protein JCGZ_15304 [Jatropha curcas]
11 Hb_000046_160 0.3106154444 - - Pentatricopeptide repeat-containing protein, mitochondrial [Glycine soja]
12 Hb_026239_010 0.3127490645 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_000191_120 0.3127767157 - - -
14 Hb_178063_010 0.3152199529 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
15 Hb_003005_040 0.3222178824 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_000111_010 0.3256669836 - - DNA-directed RNA polymerase, putative [Ricinus communis]
17 Hb_000856_370 0.3274745276 - - PREDICTED: protein NETWORKED 1A [Jatropha curcas]
18 Hb_132840_130 0.3277212269 - - PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X1 [Jatropha curcas]
19 Hb_173468_010 0.3365567494 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
20 Hb_020334_010 0.340612599 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_014568_020 Hb_014568_020 Hb_000608_460 Hb_000608_460 Hb_014568_020--Hb_000608_460 Hb_000915_030 Hb_000915_030 Hb_014568_020--Hb_000915_030 Hb_181240_010 Hb_181240_010 Hb_014568_020--Hb_181240_010 Hb_002888_010 Hb_002888_010 Hb_014568_020--Hb_002888_010 Hb_000363_150 Hb_000363_150 Hb_014568_020--Hb_000363_150 Hb_004324_080 Hb_004324_080 Hb_014568_020--Hb_004324_080 Hb_000608_460--Hb_002888_010 Hb_000608_460--Hb_000915_030 Hb_000608_460--Hb_004324_080 Hb_000608_460--Hb_181240_010 Hb_004448_060 Hb_004448_060 Hb_000608_460--Hb_004448_060 Hb_000915_030--Hb_181240_010 Hb_004734_050 Hb_004734_050 Hb_000915_030--Hb_004734_050 Hb_000915_030--Hb_000363_150 Hb_000915_030--Hb_004448_060 Hb_181240_010--Hb_004734_050 Hb_181240_010--Hb_004324_080 Hb_003005_040 Hb_003005_040 Hb_181240_010--Hb_003005_040 Hb_162633_010 Hb_162633_010 Hb_002888_010--Hb_162633_010 Hb_000310_070 Hb_000310_070 Hb_002888_010--Hb_000310_070 Hb_148209_060 Hb_148209_060 Hb_002888_010--Hb_148209_060 Hb_003144_050 Hb_003144_050 Hb_002888_010--Hb_003144_050 Hb_000111_010 Hb_000111_010 Hb_000363_150--Hb_000111_010 Hb_000856_370 Hb_000856_370 Hb_000363_150--Hb_000856_370 Hb_012053_040 Hb_012053_040 Hb_000363_150--Hb_012053_040 Hb_088538_010 Hb_088538_010 Hb_000363_150--Hb_088538_010 Hb_000227_200 Hb_000227_200 Hb_000363_150--Hb_000227_200 Hb_001158_190 Hb_001158_190 Hb_000363_150--Hb_001158_190 Hb_000046_160 Hb_000046_160 Hb_004324_080--Hb_000046_160 Hb_004324_080--Hb_003005_040 Hb_004324_080--Hb_004734_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.123272 0.193709 0.331561 0 0.1831

CAGE analysis