Hb_014720_120

Information

Type -
Description -
Location Contig14720: 143917-147854
Sequence    

Annotation

kegg
ID rcu:RCOM_1510440
description Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative
nr
ID KHG30000.1
description Phosphoenolpyruvate/phosphate translocator 1, chloroplastic -like protein [Gossypium arboreum]
swissprot
ID Q8RXN3
description Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1
trembl
ID A0A0B0PY64
description Phosphoenolpyruvate/phosphate translocator 1, chloroplastic-like protein OS=Gossypium arboreum GN=F383_07130 PE=4 SV=1
Gene Ontology
ID GO:0005739
description phosphate phosphoenolpyruvate translocator precursor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11966: 143177-147771 , PASA_asmbl_11967: 144049-147773
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014720_120 0.0 - - Phosphoenolpyruvate/phosphate translocator 1, chloroplastic -like protein [Gossypium arboreum]
2 Hb_000220_010 0.0587751056 - - PREDICTED: uncharacterized protein LOC105630083 [Jatropha curcas]
3 Hb_002245_030 0.0676994692 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
4 Hb_120410_010 0.0716778994 - - PREDICTED: vesicle-associated membrane protein 727-like [Solanum tuberosum]
5 Hb_000086_170 0.0729013886 - - PREDICTED: serine/threonine-protein kinase 19 [Jatropha curcas]
6 Hb_010381_090 0.0737149417 - - PREDICTED: protein FLX-like 3 [Jatropha curcas]
7 Hb_007878_010 0.0745589513 - - PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Jatropha curcas]
8 Hb_002641_060 0.0752405277 - - prefoldin subunit, putative [Ricinus communis]
9 Hb_156635_010 0.0753323647 - - PREDICTED: autophagy-related protein 8f [Jatropha curcas]
10 Hb_000649_230 0.0754209819 - - PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Jatropha curcas]
11 Hb_002872_030 0.0767822346 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
12 Hb_001142_030 0.0779514622 - - PREDICTED: uncharacterized protein LOC105640023 [Jatropha curcas]
13 Hb_005731_050 0.0789023368 - - hypothetical protein JCGZ_26820 [Jatropha curcas]
14 Hb_007416_300 0.0790014225 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
15 Hb_002740_030 0.0792204477 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
16 Hb_004116_060 0.0799220879 - - PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
17 Hb_000580_180 0.0801222698 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003185_010 0.0813522984 - - PREDICTED: V-type proton ATPase subunit c''1 [Jatropha curcas]
19 Hb_003938_090 0.0815803308 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008453_140 0.0817608311 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]

Gene co-expression network

sample Hb_014720_120 Hb_014720_120 Hb_000220_010 Hb_000220_010 Hb_014720_120--Hb_000220_010 Hb_002245_030 Hb_002245_030 Hb_014720_120--Hb_002245_030 Hb_120410_010 Hb_120410_010 Hb_014720_120--Hb_120410_010 Hb_000086_170 Hb_000086_170 Hb_014720_120--Hb_000086_170 Hb_010381_090 Hb_010381_090 Hb_014720_120--Hb_010381_090 Hb_007878_010 Hb_007878_010 Hb_014720_120--Hb_007878_010 Hb_008453_140 Hb_008453_140 Hb_000220_010--Hb_008453_140 Hb_007451_010 Hb_007451_010 Hb_000220_010--Hb_007451_010 Hb_000220_010--Hb_010381_090 Hb_000220_010--Hb_120410_010 Hb_002740_030 Hb_002740_030 Hb_000220_010--Hb_002740_030 Hb_002245_030--Hb_000220_010 Hb_000796_210 Hb_000796_210 Hb_002245_030--Hb_000796_210 Hb_005730_120 Hb_005730_120 Hb_002245_030--Hb_005730_120 Hb_002601_110 Hb_002601_110 Hb_002245_030--Hb_002601_110 Hb_007423_040 Hb_007423_040 Hb_002245_030--Hb_007423_040 Hb_120410_010--Hb_008453_140 Hb_004116_060 Hb_004116_060 Hb_120410_010--Hb_004116_060 Hb_001142_030 Hb_001142_030 Hb_120410_010--Hb_001142_030 Hb_002530_030 Hb_002530_030 Hb_120410_010--Hb_002530_030 Hb_120410_010--Hb_002740_030 Hb_120410_010--Hb_010381_090 Hb_000270_310 Hb_000270_310 Hb_000086_170--Hb_000270_310 Hb_004312_010 Hb_004312_010 Hb_000086_170--Hb_004312_010 Hb_161574_020 Hb_161574_020 Hb_000086_170--Hb_161574_020 Hb_000336_210 Hb_000336_210 Hb_000086_170--Hb_000336_210 Hb_002272_050 Hb_002272_050 Hb_000086_170--Hb_002272_050 Hb_007416_300 Hb_007416_300 Hb_010381_090--Hb_007416_300 Hb_002872_030 Hb_002872_030 Hb_010381_090--Hb_002872_030 Hb_010381_090--Hb_008453_140 Hb_010381_090--Hb_001142_030 Hb_003549_150 Hb_003549_150 Hb_010381_090--Hb_003549_150 Hb_007878_010--Hb_161574_020 Hb_002641_060 Hb_002641_060 Hb_007878_010--Hb_002641_060 Hb_002171_060 Hb_002171_060 Hb_007878_010--Hb_002171_060 Hb_001278_100 Hb_001278_100 Hb_007878_010--Hb_001278_100 Hb_000720_040 Hb_000720_040 Hb_007878_010--Hb_000720_040 Hb_007878_010--Hb_000270_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.0811 35.1147 54.1703 56.2764 52.7364 46.1829
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.5152 65.0848 37.1754 27.7547 26.2466

CAGE analysis