Hb_014720_160

Information

Type -
Description -
Location Contig14720: 168705-173402
Sequence    

Annotation

kegg
ID rcu:RCOM_1510360
description anthranilate phosphoribosyltransferase, putative (EC:2.4.2.18)
nr
ID XP_012080040.1
description PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic [Jatropha curcas]
swissprot
ID Q02166
description Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1
trembl
ID A0A067KGW1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11455 PE=3 SV=1
Gene Ontology
ID GO:0009570
description anthranilate chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11975: 168683-169782 , PASA_asmbl_11976: 170655-172488
cDNA
(Sanger)
(ID:Location)		 017_I10.ab1: 168695-169224 , 047_E02.ab1: 168683-169761

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014720_160 0.0 - - PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic [Jatropha curcas]
2 Hb_000922_330 0.0667095717 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
3 Hb_007547_010 0.0825799966 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
4 Hb_000085_060 0.0887124863 - - PREDICTED: uncharacterized protein LOC105633020 [Jatropha curcas]
5 Hb_003609_040 0.0887137775 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
6 Hb_000001_020 0.0894969119 - - PREDICTED: homogentisate solanesyltransferase, chloroplastic [Jatropha curcas]
7 Hb_005662_030 0.0936263296 - - protein with unknown function [Ricinus communis]
8 Hb_006065_020 0.0942840549 - - -
9 Hb_000392_300 0.0944182661 - - PREDICTED: RINT1-like protein MAG2 [Jatropha curcas]
10 Hb_002506_020 0.0962393242 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1-like isoform X1 [Populus euphratica]
11 Hb_031527_100 0.0980602109 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000645_050 0.0982287418 - - peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Populus trichocarpa]
13 Hb_002182_040 0.0988608332 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_002527_030 0.0991915443 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Jatropha curcas]
15 Hb_003641_050 0.0998158041 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic [Jatropha curcas]
16 Hb_000761_020 0.0998349652 - - PREDICTED: uncharacterized protein LOC105638198 [Jatropha curcas]
17 Hb_001616_080 0.1000930628 - - Oleoyl-acyl carrier protein thioesterase, putative [Ricinus communis]
18 Hb_000481_040 0.1028576401 - - developmentally regulated GTP-binding protein, putative [Ricinus communis]
19 Hb_000030_010 0.1044742754 - - PREDICTED: uncharacterized protein LOC105632627 [Jatropha curcas]
20 Hb_006130_010 0.1068062195 - - PREDICTED: CTP synthase [Jatropha curcas]

Gene co-expression network

sample Hb_014720_160 Hb_014720_160 Hb_000922_330 Hb_000922_330 Hb_014720_160--Hb_000922_330 Hb_007547_010 Hb_007547_010 Hb_014720_160--Hb_007547_010 Hb_000085_060 Hb_000085_060 Hb_014720_160--Hb_000085_060 Hb_003609_040 Hb_003609_040 Hb_014720_160--Hb_003609_040 Hb_000001_020 Hb_000001_020 Hb_014720_160--Hb_000001_020 Hb_005662_030 Hb_005662_030 Hb_014720_160--Hb_005662_030 Hb_003641_050 Hb_003641_050 Hb_000922_330--Hb_003641_050 Hb_000922_330--Hb_000085_060 Hb_000679_130 Hb_000679_130 Hb_000922_330--Hb_000679_130 Hb_000922_330--Hb_005662_030 Hb_002527_030 Hb_002527_030 Hb_000922_330--Hb_002527_030 Hb_007547_010--Hb_003609_040 Hb_000030_010 Hb_000030_010 Hb_007547_010--Hb_000030_010 Hb_002182_040 Hb_002182_040 Hb_007547_010--Hb_002182_040 Hb_007547_010--Hb_000001_020 Hb_003297_030 Hb_003297_030 Hb_007547_010--Hb_003297_030 Hb_001124_120 Hb_001124_120 Hb_000085_060--Hb_001124_120 Hb_076787_010 Hb_076787_010 Hb_000085_060--Hb_076787_010 Hb_031939_010 Hb_031939_010 Hb_000085_060--Hb_031939_010 Hb_001014_010 Hb_001014_010 Hb_000085_060--Hb_001014_010 Hb_003406_010 Hb_003406_010 Hb_000085_060--Hb_003406_010 Hb_007218_080 Hb_007218_080 Hb_000085_060--Hb_007218_080 Hb_003609_040--Hb_000001_020 Hb_000943_070 Hb_000943_070 Hb_003609_040--Hb_000943_070 Hb_003609_040--Hb_000030_010 Hb_000172_370 Hb_000172_370 Hb_003609_040--Hb_000172_370 Hb_003609_040--Hb_003297_030 Hb_000025_200 Hb_000025_200 Hb_000001_020--Hb_000025_200 Hb_007908_020 Hb_007908_020 Hb_000001_020--Hb_007908_020 Hb_000017_120 Hb_000017_120 Hb_000001_020--Hb_000017_120 Hb_000107_390 Hb_000107_390 Hb_000001_020--Hb_000107_390 Hb_000761_020 Hb_000761_020 Hb_000001_020--Hb_000761_020 Hb_001862_190 Hb_001862_190 Hb_005662_030--Hb_001862_190 Hb_000620_010 Hb_000620_010 Hb_005662_030--Hb_000620_010 Hb_000184_110 Hb_000184_110 Hb_005662_030--Hb_000184_110 Hb_000028_610 Hb_000028_610 Hb_005662_030--Hb_000028_610 Hb_006065_020 Hb_006065_020 Hb_005662_030--Hb_006065_020 Hb_001017_040 Hb_001017_040 Hb_005662_030--Hb_001017_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
61.0355 11.5587 23.2353 19.6462 62.3206 46.322
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.6492 33.9999 40.1345 10.9185 23.5774

CAGE analysis