Hb_014834_020

Information

Type -
Description -
Location Contig14834: 20352-22811
Sequence    

Annotation

kegg
ID fve:101302163
description auxin-induced protein 5NG4-like
nr
ID XP_012069987.1
description PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FGL0
description WAT1-related protein At5g47470 OS=Arabidopsis thaliana GN=At5g47470 PE=3 SV=1
trembl
ID A0A067KUJ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03407 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wat1-related protein at5g47470

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014834_020 0.0 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
2 Hb_011214_120 0.1852715495 - - PREDICTED: uncharacterized protein LOC105636139 [Jatropha curcas]
3 Hb_080147_060 0.1931960612 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
4 Hb_000589_210 0.2017841598 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
5 Hb_001959_030 0.2068743111 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000364_200 0.2228583008 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_000041_290 0.2271198178 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
8 Hb_000915_070 0.2272637081 - - ATP binding protein, putative [Ricinus communis]
9 Hb_002783_200 0.2374786198 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
10 Hb_002016_020 0.2391770088 - - RALFL33, putative [Ricinus communis]
11 Hb_173741_010 0.2445919192 - - PREDICTED: caffeoyl-CoA O-methyltransferase isoform X3 [Musa acuminata subsp. malaccensis]
12 Hb_000080_080 0.2457025667 - - -
13 Hb_002597_010 0.2466454657 - - PREDICTED: putative disease resistance protein RGA1 [Malus domestica]
14 Hb_001369_140 0.2485099584 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004129_050 0.250735723 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
16 Hb_000244_280 0.2515795201 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X1 [Jatropha curcas]
17 Hb_025254_020 0.2532366737 - - PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]
18 Hb_003025_010 0.2544465713 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Populus euphratica]
19 Hb_000976_440 0.2655925543 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_048476_010 0.2667720627 - - PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Citrus sinensis]

Gene co-expression network

sample Hb_014834_020 Hb_014834_020 Hb_011214_120 Hb_011214_120 Hb_014834_020--Hb_011214_120 Hb_080147_060 Hb_080147_060 Hb_014834_020--Hb_080147_060 Hb_000589_210 Hb_000589_210 Hb_014834_020--Hb_000589_210 Hb_001959_030 Hb_001959_030 Hb_014834_020--Hb_001959_030 Hb_000364_200 Hb_000364_200 Hb_014834_020--Hb_000364_200 Hb_000041_290 Hb_000041_290 Hb_014834_020--Hb_000041_290 Hb_011214_120--Hb_001959_030 Hb_011214_120--Hb_000589_210 Hb_098030_010 Hb_098030_010 Hb_011214_120--Hb_098030_010 Hb_011214_120--Hb_000364_200 Hb_002016_020 Hb_002016_020 Hb_011214_120--Hb_002016_020 Hb_002597_010 Hb_002597_010 Hb_080147_060--Hb_002597_010 Hb_000003_510 Hb_000003_510 Hb_080147_060--Hb_000003_510 Hb_080147_060--Hb_000041_290 Hb_080147_060--Hb_002016_020 Hb_000580_070 Hb_000580_070 Hb_080147_060--Hb_000580_070 Hb_080147_060--Hb_001959_030 Hb_000589_210--Hb_002597_010 Hb_025254_020 Hb_025254_020 Hb_000589_210--Hb_025254_020 Hb_000589_210--Hb_080147_060 Hb_007545_140 Hb_007545_140 Hb_000589_210--Hb_007545_140 Hb_000589_210--Hb_001959_030 Hb_002042_200 Hb_002042_200 Hb_001959_030--Hb_002042_200 Hb_001959_030--Hb_025254_020 Hb_001959_030--Hb_002016_020 Hb_018133_110 Hb_018133_110 Hb_001959_030--Hb_018133_110 Hb_001369_620 Hb_001369_620 Hb_001959_030--Hb_001369_620 Hb_000175_480 Hb_000175_480 Hb_001959_030--Hb_000175_480 Hb_000364_200--Hb_000589_210 Hb_000915_070 Hb_000915_070 Hb_000364_200--Hb_000915_070 Hb_000364_200--Hb_001959_030 Hb_000056_220 Hb_000056_220 Hb_000364_200--Hb_000056_220 Hb_000041_290--Hb_001369_620 Hb_000041_290--Hb_002597_010 Hb_000041_290--Hb_001959_030 Hb_001021_030 Hb_001021_030 Hb_000041_290--Hb_001021_030 Hb_000041_290--Hb_002016_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.225344 0.453735 0.654789 1.36073 0.408814 0.452436
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.132654 0.156539 0 3.89772 0

CAGE analysis