Hb_014834_120

Information

Type -
Description -
Location Contig14834: 78347-81605
Sequence    

Annotation

kegg
ID rcu:RCOM_1388540
description hypothetical protein
nr
ID XP_012070008.1
description PREDICTED: uncharacterized protein LOC105632280 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L5W0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03416 PE=4 SV=1
Gene Ontology
ID GO:0005634
description 1-phosphatidylinositol- -bisphosphate phosphodiesterase delta-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12180: 80493-81687
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014834_120 0.0 - - PREDICTED: uncharacterized protein LOC105632280 [Jatropha curcas]
2 Hb_032531_030 0.0988394586 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
3 Hb_001842_070 0.1229203077 - - PREDICTED: uncharacterized protein LOC105637106 [Jatropha curcas]
4 Hb_001476_100 0.1287706788 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002506_010 0.1294064489 - - choline transporter-related family protein [Populus trichocarpa]
6 Hb_009510_030 0.1305939039 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
7 Hb_000057_060 0.1319182513 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
8 Hb_004126_010 0.1329029238 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
9 Hb_000933_140 0.1343155447 - - PREDICTED: uncharacterized protein LOC105630501 [Jatropha curcas]
10 Hb_002038_060 0.1356101388 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100265010 [Vitis vinifera]
11 Hb_103873_010 0.1363731266 - - hypothetical protein POPTR_0008s14260g [Populus trichocarpa]
12 Hb_000571_070 0.1379693406 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
13 Hb_014067_010 0.1381351492 - - hypothetical protein JCGZ_09524 [Jatropha curcas]
14 Hb_002955_030 0.1397993859 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000387_080 0.140063272 - - PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Jatropha curcas]
16 Hb_003786_110 0.1412460919 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
17 Hb_000185_120 0.1413374557 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
18 Hb_006602_020 0.141596659 - - unknown [Medicago truncatula]
19 Hb_000084_310 0.1418612384 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
20 Hb_000291_200 0.14207189 - - -

Gene co-expression network

sample Hb_014834_120 Hb_014834_120 Hb_032531_030 Hb_032531_030 Hb_014834_120--Hb_032531_030 Hb_001842_070 Hb_001842_070 Hb_014834_120--Hb_001842_070 Hb_001476_100 Hb_001476_100 Hb_014834_120--Hb_001476_100 Hb_002506_010 Hb_002506_010 Hb_014834_120--Hb_002506_010 Hb_009510_030 Hb_009510_030 Hb_014834_120--Hb_009510_030 Hb_000057_060 Hb_000057_060 Hb_014834_120--Hb_000057_060 Hb_066807_010 Hb_066807_010 Hb_032531_030--Hb_066807_010 Hb_001902_050 Hb_001902_050 Hb_032531_030--Hb_001902_050 Hb_002038_060 Hb_002038_060 Hb_032531_030--Hb_002038_060 Hb_032531_030--Hb_000057_060 Hb_026048_100 Hb_026048_100 Hb_032531_030--Hb_026048_100 Hb_007760_030 Hb_007760_030 Hb_001842_070--Hb_007760_030 Hb_011224_080 Hb_011224_080 Hb_001842_070--Hb_011224_080 Hb_000317_430 Hb_000317_430 Hb_001842_070--Hb_000317_430 Hb_000365_360 Hb_000365_360 Hb_001842_070--Hb_000365_360 Hb_063134_010 Hb_063134_010 Hb_001842_070--Hb_063134_010 Hb_006693_030 Hb_006693_030 Hb_001842_070--Hb_006693_030 Hb_001017_090 Hb_001017_090 Hb_001476_100--Hb_001017_090 Hb_002067_160 Hb_002067_160 Hb_001476_100--Hb_002067_160 Hb_000696_110 Hb_000696_110 Hb_001476_100--Hb_000696_110 Hb_006602_020 Hb_006602_020 Hb_001476_100--Hb_006602_020 Hb_000700_090 Hb_000700_090 Hb_001476_100--Hb_000700_090 Hb_001476_100--Hb_000057_060 Hb_002506_010--Hb_009510_030 Hb_003404_030 Hb_003404_030 Hb_002506_010--Hb_003404_030 Hb_002506_010--Hb_000057_060 Hb_002506_010--Hb_001017_090 Hb_010174_130 Hb_010174_130 Hb_002506_010--Hb_010174_130 Hb_000387_080 Hb_000387_080 Hb_002506_010--Hb_000387_080 Hb_004126_010 Hb_004126_010 Hb_009510_030--Hb_004126_010 Hb_026048_090 Hb_026048_090 Hb_009510_030--Hb_026048_090 Hb_000771_140 Hb_000771_140 Hb_009510_030--Hb_000771_140 Hb_009510_030--Hb_000057_060 Hb_003001_030 Hb_003001_030 Hb_009510_030--Hb_003001_030 Hb_001433_170 Hb_001433_170 Hb_000057_060--Hb_001433_170 Hb_000057_060--Hb_003404_030 Hb_000057_060--Hb_000771_140 Hb_127979_010 Hb_127979_010 Hb_000057_060--Hb_127979_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
42.6863 0.971095 1.03073 6.22363 48.7511 72.6626
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.5913 37.1038 45.6095 2.77417 9.58137

CAGE analysis