Hb_014894_010

Information

Type -
Description -
Location Contig14894: 7568-23424
Sequence    

Annotation

kegg
ID cic:CICLE_v10001869mg
description hypothetical protein
nr
ID XP_006433314.1
description hypothetical protein CICLE_v10001869mg [Citrus clementina]
swissprot
ID Q9MA90
description Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana GN=PNC1 PE=1 SV=1
trembl
ID A0A067EYM0
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021007mg PE=3 SV=1
Gene Ontology
ID GO:0005743
description peroxisomal adenine nucleotide carrier 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014894_010 0.0 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
2 Hb_001246_030 0.100147261 - - hypothetical protein JCGZ_14672 [Jatropha curcas]
3 Hb_119494_010 0.1033266389 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
4 Hb_002005_100 0.1233078868 - - -
5 Hb_001258_060 0.1254735988 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
6 Hb_004079_080 0.1264893348 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
7 Hb_008864_090 0.1326456444 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
8 Hb_008147_070 0.1370832489 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
9 Hb_001214_090 0.1396362482 - - PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal [Jatropha curcas]
10 Hb_000417_320 0.1406692505 - - hypothetical protein CICLE_v10000333mg [Citrus clementina]
11 Hb_109002_020 0.1420311131 - - PREDICTED: CTP synthase-like [Jatropha curcas]
12 Hb_039145_010 0.1427168601 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
13 Hb_077562_030 0.1430065929 - - PREDICTED: cytochrome P450 4X1-like isoform X1 [Jatropha curcas]
14 Hb_001157_110 0.1479363282 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
15 Hb_004064_010 0.1508313136 - - PREDICTED: uncharacterized protein LOC105133340 isoform X1 [Populus euphratica]
16 Hb_105602_010 0.1510337725 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
17 Hb_001332_040 0.1532826656 - - PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca]
18 Hb_002027_140 0.1576343716 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
19 Hb_028811_010 0.1579080283 - - PREDICTED: uncharacterized protein LOC105650178 isoform X1 [Jatropha curcas]
20 Hb_019053_030 0.1593621447 - - PREDICTED: sulfite oxidase [Jatropha curcas]

Gene co-expression network

sample Hb_014894_010 Hb_014894_010 Hb_001246_030 Hb_001246_030 Hb_014894_010--Hb_001246_030 Hb_119494_010 Hb_119494_010 Hb_014894_010--Hb_119494_010 Hb_002005_100 Hb_002005_100 Hb_014894_010--Hb_002005_100 Hb_001258_060 Hb_001258_060 Hb_014894_010--Hb_001258_060 Hb_004079_080 Hb_004079_080 Hb_014894_010--Hb_004079_080 Hb_008864_090 Hb_008864_090 Hb_014894_010--Hb_008864_090 Hb_001157_110 Hb_001157_110 Hb_001246_030--Hb_001157_110 Hb_000497_110 Hb_000497_110 Hb_001246_030--Hb_000497_110 Hb_098315_080 Hb_098315_080 Hb_001246_030--Hb_098315_080 Hb_001246_030--Hb_119494_010 Hb_001246_030--Hb_002005_100 Hb_003253_050 Hb_003253_050 Hb_119494_010--Hb_003253_050 Hb_119494_010--Hb_002005_100 Hb_002400_410 Hb_002400_410 Hb_119494_010--Hb_002400_410 Hb_008147_070 Hb_008147_070 Hb_119494_010--Hb_008147_070 Hb_001214_090 Hb_001214_090 Hb_119494_010--Hb_001214_090 Hb_000190_090 Hb_000190_090 Hb_002005_100--Hb_000190_090 Hb_019053_030 Hb_019053_030 Hb_002005_100--Hb_019053_030 Hb_004411_060 Hb_004411_060 Hb_002005_100--Hb_004411_060 Hb_002005_100--Hb_001214_090 Hb_016522_010 Hb_016522_010 Hb_002005_100--Hb_016522_010 Hb_004242_190 Hb_004242_190 Hb_001258_060--Hb_004242_190 Hb_001258_060--Hb_008864_090 Hb_001258_060--Hb_001246_030 Hb_000805_320 Hb_000805_320 Hb_001258_060--Hb_000805_320 Hb_007763_030 Hb_007763_030 Hb_001258_060--Hb_007763_030 Hb_000621_020 Hb_000621_020 Hb_004079_080--Hb_000621_020 Hb_004079_080--Hb_001214_090 Hb_001623_160 Hb_001623_160 Hb_004079_080--Hb_001623_160 Hb_001971_060 Hb_001971_060 Hb_004079_080--Hb_001971_060 Hb_004079_080--Hb_016522_010 Hb_100147_010 Hb_100147_010 Hb_004079_080--Hb_100147_010 Hb_008864_090--Hb_119494_010 Hb_001427_070 Hb_001427_070 Hb_008864_090--Hb_001427_070 Hb_010029_020 Hb_010029_020 Hb_008864_090--Hb_010029_020 Hb_077562_030 Hb_077562_030 Hb_008864_090--Hb_077562_030 Hb_008864_090--Hb_008147_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.10316 1.16437 0.486252 1.09885 1.0435 1.14578
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.9232 1.87488 2.49211 6.46182 1.32154

CAGE analysis