Hb_015026_010

Information

Type -
Description -
Location Contig15026: 310-682
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015026_010 0.0 - - -
2 Hb_062226_080 0.0363701637 - - -
3 Hb_002267_040 0.0410128807 - - -
4 Hb_005888_040 0.0445268259 - - PREDICTED: gibberellin 20 oxidase 2 [Jatropha curcas]
5 Hb_000501_090 0.0611498732 - - -
6 Hb_009252_110 0.0762994492 - - hypothetical protein JCGZ_11492 [Jatropha curcas]
7 Hb_066350_010 0.0784370507 - - somatic embryogenesis receptor-like kinase 4, partial [Rosa hybrid cultivar]
8 Hb_001645_100 0.0957854067 - - -
9 Hb_000658_020 0.0963071081 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Musa acuminata subsp. malaccensis]
10 Hb_105446_010 0.0970850215 - - -
11 Hb_004724_010 0.1019098201 - - -
12 Hb_000146_100 0.1106602932 - - conserved hypothetical protein [Ricinus communis]
13 Hb_112011_010 0.1122516786 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
14 Hb_012879_010 0.1204147828 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000751_210 0.1359295589 - - PREDICTED: petal death protein isoform X2 [Jatropha curcas]
16 Hb_017866_010 0.1387278924 - - kinase family protein [Populus trichocarpa]
17 Hb_005900_020 0.1428460033 - - -
18 Hb_000504_050 0.1460663759 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
19 Hb_132438_010 0.1529053961 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
20 Hb_000174_020 0.157469898 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]

Gene co-expression network

sample Hb_015026_010 Hb_015026_010 Hb_062226_080 Hb_062226_080 Hb_015026_010--Hb_062226_080 Hb_002267_040 Hb_002267_040 Hb_015026_010--Hb_002267_040 Hb_005888_040 Hb_005888_040 Hb_015026_010--Hb_005888_040 Hb_000501_090 Hb_000501_090 Hb_015026_010--Hb_000501_090 Hb_009252_110 Hb_009252_110 Hb_015026_010--Hb_009252_110 Hb_066350_010 Hb_066350_010 Hb_015026_010--Hb_066350_010 Hb_062226_080--Hb_005888_040 Hb_062226_080--Hb_002267_040 Hb_062226_080--Hb_009252_110 Hb_105446_010 Hb_105446_010 Hb_062226_080--Hb_105446_010 Hb_062226_080--Hb_066350_010 Hb_002267_040--Hb_005888_040 Hb_002267_040--Hb_009252_110 Hb_002267_040--Hb_066350_010 Hb_002267_040--Hb_000501_090 Hb_005888_040--Hb_009252_110 Hb_005888_040--Hb_105446_010 Hb_005888_040--Hb_066350_010 Hb_001645_100 Hb_001645_100 Hb_000501_090--Hb_001645_100 Hb_000501_090--Hb_066350_010 Hb_000501_090--Hb_062226_080 Hb_000501_090--Hb_005888_040 Hb_009252_110--Hb_105446_010 Hb_009252_110--Hb_066350_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.313558 0 0.63093 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.144455 0

CAGE analysis